DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ubi-p5E and Ubqln2

DIOPT Version :9

Sequence 1:	NP_001284937.1	Gene:	Ubi-p5E / 326237	FlyBaseID:	FBgn0086558	Length:	534	Species:	Drosophila melanogaster
Sequence 2:	NP_001101721.1	Gene:	Ubqln2 / 317396	RGDID:	1563566	Length:	638	Species:	Rattus norvegicus

Alignment Length:	108	Identity:	32/108 - (29%)
Similarity:	46/108 - (42%)	Gaps:	11/108 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            :::.|||...|. ...|..:.|::..|..|..:.....||..||||||.|:|..||..:.|....
  Rat    33 IKVTVKTPKEKE-EFAVPENSTVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDGL 96

  Fly    66 TLHLVLRLRGGMQ----------IFVKTLTGKTITLEVEPSDT 98
            |:|||::.:...|          ....|.|..|.|....|:.|
  Rat    97 TVHLVIKSQNRPQGQATTQPSTTAGTSTTTTTTTTAAAPPAAT 139

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ubi-p5E	NP_001284937.1	Ubiquitin	1..76	CDD:176398	25/74 (34%)
		UBQ	1..72	CDD:214563	25/70 (36%)
		Ubiquitin	77..152	CDD:176398	7/32 (22%)
		UBQ	77..148	CDD:214563	7/32 (22%)
		Ubiquitin	153..228	CDD:176398
		UBQ	153..224	CDD:214563
		Ubiquitin	229..304	CDD:176398
		UBQ	229..300	CDD:214563
		Ubiquitin	305..380	CDD:176398
		UBQ	305..376	CDD:214563
		Ubiquitin	381..456	CDD:176398
		UBQ	381..452	CDD:214563
		Ubiquitin	457..532	CDD:176398
		UBQ	457..528	CDD:214563
Ubqln2	NP_001101721.1	UBQ	33..103	CDD:214563	25/70 (36%)
		hPLIC_N	33..103	CDD:176403	25/70 (36%)
		STI1	194..227	CDD:128966
		STI1	393..440	CDD:128966
		UBA_PLICs	595..634	CDD:270582
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900