DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and Ubqln3

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001371113.1 Gene:Ubqln3 / 244178 MGIID:3045291 Length:681 Species:Mus musculus


Alignment Length:606 Identity:120/606 - (19%)
Similarity:212/606 - (34%) Gaps:173/606 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            :::.|||...|. ...|..:.||..:|.||..:....|:|..||||||.|:|..:|:...::...
Mouse    45 IRVTVKTPKDKE-DFSVVDTCTIRQLKEKISHRFKAHPNQLVLIFAGKILKDPDSLAQCGVRDGL 108

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE---------NVKAKIQDKEGIPPDQQRLIF 121
            |:|||::::           .:||..|. ||..:.         ...:.:...:|.|.....::.
Mouse   109 TVHLVIKMQ-----------RRTIGTEC-PSPPVSIPGPNPGEIPQSSSVYSVDGSPSFSLGVLT 161

  Fly   122 AGKQLEDGRTLSDYNIQKESTL-------HLVLRLRGGMQIFVKTLTGKT--------------- 164
            ....|  |.|...::.|..|.:       .||.:|..  ..|::.|...|               
Mouse   162 GLSGL--GLTSGSFSDQPGSLMWQHISVPELVAQLVD--DPFIQGLLSNTGLVRQLVLDNPHMQH 222

  Fly   165 -ITLEVEPSDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD-------YNIQK---- 215
             |....|....:.|.:...|..|.:  |...|.::    :.:| |.||:       ||:.:    
Mouse   223 LIQQNPEIGHILNNPEIMRQTMEFLRNPSMMQEMM----RSQD-RALSNLESIPGGYNVLRTMYT 282

  Fly   216 ---ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 277
               :..|:.|....|| ..||...|..|.|...:||.| ||.     |....|......:..|:|
Mouse   283 DIMDPMLNAVQEQFGG-NPFVTATTASTTTTSSQPSRT-ENC-----DPLPNPWTSTYGVSGGRQ 340

  Fly   278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 342
            ...||...|.:..:.         |..:..|:..: |....|: :..:|.:::::.:|.......
Mouse   341 GRGGRQSGDQDASEN---------RNRLPSFLGNI-GLFDYLQ-QLHETSQSLESYLQGTVPTSN 394

  Fly   343 DQQRLIFAGKQL-----EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT------------- 389
            ..|....:|.::     ...::.|..::.|||   :.::.:.....|::..|             
Mouse   395 PSQESPLSGNRVPPTLPSSPKSGSGQSLPKES---VAIKGKSSCPAFLRHSTENSTGQGGSLHDA 456

  Fly   390 GKTITLEVEPSDTIENVKAKIQDKEG-----------------------IPPD--QQRLIFAGKQ 429
            ||..|   .||.::.|:.::|.|...                       :||.  .:.|..||..
Mouse   457 GKGST---GPSTSLPNLTSQIGDSANRSSFVSTPSSLMSATPGVPESPWLPPTGYSRSLRSAGTN 518

  Fly   430 LEDGRTLSDYNIQKESTLHL------------VLRLRGGMQI-----------FVKTLTGKTITL 471
             :..|..::.:.|....|||            :|::..|:||           |:..|||     
Mouse   519 -QVPRIQNEIHQQLPLLLHLQTAMANPRVMQALLQIEQGLQILATEAPRLLLWFMPCLTG----- 577

  Fly   472 EVEPSDTIENVKAKIQDKEGI 492
                   :..|....:.:||:
Mouse   578 -------LNGVTGGTEAREGV 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 25/74 (34%)
Ubl_ubiquitin 77..152 CDD:340501 15/90 (17%)
Ubl_ubiquitin 153..228 CDD:340501 18/106 (17%)
Ubl_ubiquitin 229..304 CDD:340501 18/74 (24%)
Ubl_ubiquitin 305..380 CDD:340501 11/79 (14%)
Ubl_ubiquitin 381..456 CDD:340501 21/124 (17%)
Ubl_ubiquitin 457..532 CDD:340501 9/47 (19%)
Ubqln3NP_001371113.1 Ubl_PLICs 43..115 CDD:340506 25/70 (36%)
STI1 212..256 CDD:128966 7/43 (16%)
UBA_PLICs 641..678 CDD:270582
Blue background indicates that the domain is not in the aligned region.

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