DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and F52C6.3

DIOPT Version :9

Sequence 1:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_494127.2 Gene:F52C6.3 / 186085 WormBaseID:WBGene00018660 Length:197 Species:Caenorhabditis elegans


Alignment Length:257 Identity:75/257 - (29%)
Similarity:121/257 - (47%) Gaps:72/257 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:.:||.|||.||:|...|     ||.:::||:|:       :|         |:| |:     
 Worm     1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV-------VF---------TVS-YD----- 38

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK------AKIQDKEGIPPDQQRLIFAGK 124
                    :|         ||..|   :|..||:::||      |.:::.|.:..|.       .
 Worm    39 --------KG---------TGNQI---IEMEDTVQDVKIQEAQQAPLRESEEVTEDP-------I 76

  Fly   125 QLEDGRTLSDYNIQKEST---LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 186
            .:|....:.:.|::...|   ||     ..|::|:|:. .|:|.||:...|||:.:|||||.:|.
 Worm    77 SVESSEVIGNLNVKVAETQQELH-----HEGIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKL 135

  Fly   187 GIPPDQQRLIFAGKQLE---DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245
            .|.|:.|:|:.....|:   |..||.|.:.:..|||.|.:.:...:.:||||.||||||:.:
 Worm   136 RILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398 19/74 (26%)
UBQ 1..72 CDD:214563 19/70 (27%)
Ubiquitin 77..152 CDD:176398 16/83 (19%)
UBQ 77..148 CDD:214563 16/79 (20%)
Ubiquitin 153..228 CDD:176398 28/77 (36%)
UBQ 153..224 CDD:214563 28/73 (38%)
Ubiquitin 229..304 CDD:176398 10/17 (59%)
UBQ 229..300 CDD:214563 10/17 (59%)
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
F52C6.3NP_494127.2 Ubiquitin_like_fold 103..173 CDD:391949 27/70 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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