DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and gldi-6

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001379680.1 Gene:gldi-6 / 182679 WormBaseID:WBGene00015851 Length:141 Species:Caenorhabditis elegans


Alignment Length:151 Identity:29/151 - (19%)
Similarity:57/151 - (37%) Gaps:41/151 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEVEPSDTIENVKAKIQDKEGIPPDQ---------QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
            |.||.|    .::.:.::|.|...|:         |:::    :.:.|...:..| |.:...||:
 Worm    14 LRVETS----KIQNEFREKPGYVEDKLHKNTLEMCQKIL----KKQHGFQKTQEN-QNKFIEHLI 69

  Fly    71 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF------AGKQLEDG 129
            |.|.               :::.|.||..:..:.:|..::....|:.:..|      ..|.:|| 
 Worm    70 LDLE---------------SVKKETSDMKKQQETQILKRQDEYHDEMKQEFQKIQATQNKLIED- 118

  Fly   130 RTLSDYNIQKESTLHLVLRLR 150
             .:|:....|..|..:...||
 Worm   119 -LMSELKTVKNETNDMKRNLR 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 15/69 (22%)
Ubl_ubiquitin 77..152 CDD:340501 14/80 (18%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
gldi-6NP_001379680.1 None
Blue background indicates that the domain is not in the aligned region.

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