DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and cdcp2

DIOPT Version :10

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:XP_068069672.1 Gene:cdcp2 / 567759 ZFINID:ZDB-GENE-070705-485 Length:531 Species:Danio rerio


Alignment Length:510 Identity:130/510 - (25%)
Similarity:214/510 - (41%) Gaps:100/510 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   977 KCGGVHTRSGDHIRLPVHDDSYAGEATCYWVIMAPANKAIRLHWNSFSLENAVDCIYDYLEIYDS 1041
            ||||:.:.|..::..|.....|..:..|.|:|:.....::.|.::.|.||...||.|||::||:.
Zfish    25 KCGGILSASSGNVSSPNFPGLYPYDTDCTWLIVVSEGSSVLLTFHHFELEYHTDCAYDYIKIYNG 89

  Fly  1042 LGAQVNDERSKPLAKYCGNSVPEDLLSHSRQLVLKFVSDYSESDGGFDLTYTFEDRAKCGGHIHA 1106
                ::::....|.|:||:..|....|....:.:.|.||...:..||.:.|.   :..|||.:..
Zfish    90 ----ISEDEGNLLGKFCGDVSPPQFSSSWNVMSIIFHSDRHVARKGFLVGYR---KDMCGGVLTG 147

  Fly  1107 SSGELTSPEYPANYSAGLDCDWHLTGTIDHLLEIQVENFELEQSPNCSADYLEVRNGGGTDSPLI 1171
            .||.:.||.||.:||...:|.|.:..:...|:.:...:|:||.:..|:.||:.:.:|.......:
Zfish   148 LSGVIASPGYPQDYSNNAECSWTVQVSNQSLVSLVFLDFQLENNEGCNFDYVALFDGPTVKHHHL 212

  Fly  1172 GRFCGRDIPARIPGFSHEMRLILHTDSAINGRGFRLRWRIFAFGCGGSLRSNMGAISSPRYPNSY 1236
            |.:||.:.|......|:::.::..:|..|.||||:..:  |:..|...|:...|..:||.|||.|
Zfish   213 GNYCGNEQPPNTITTSNQLLVVFKSDFNIGGRGFKAYY--FSGECQQFLKDISGNFTSPHYPNIY 275

  Fly  1237 PNMAHCEWRISLHPGSGISLLIEDLELEG----LSNCYYDSVKIYTGIKLPNQSPCKVL---CKD 1294
            ||..:|.|.|:|..|..:.|....||||.    .|.|.||||.:|.|    :.....||   |..
Zfish   276 PNNINCHWTITLAAGYRVKLFFPFLELEDRNSLTSMCDYDSVAVYDG----DSEADSVLGQWCGS 336

  Fly  1295 DDLHNPLIQLENNKGTIVFDSDASNTFRGFRISYKANCIRNLTATTGTIESLNYMEPFWETIPIN 1359
            :  ..|.:....||..:|.::|.:..|:||..||..                        .:|:|
Zfish   337 E--QPPSLTSRGNKLLVVLNTDRNFAFKGFTASYLG------------------------VVPVN 375

  Fly  1360 CSWT----------------------IRAPKGNRVLVEVSH-----------LARHEQHVPTATM 1391
            .|.|                      :..|..:..|.|.|:           .|:..|::  ..:
Zfish   376 ISCTRTEFQIQISRQALPQLERENVYLGNPSCSAQLTETSYKILGRFVNCGTAAQKRQNI--TML 438

  Fly  1392 PGGLYI--VDG--RNVQE---------------IVTPQAMNISGEVLTVVHNASN 1427
            ...|||  .||  :|:||               |::.:..|...|:..:...::|
Zfish   439 VNSLYIDVSDGPQQNIQEYEVQCDAQRKVAMINIISAEERNRLNELARLAEQSNN 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 cubilin_NTD 21..149 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_CA 324..367 CDD:214542
EGF 430..457 CDD:394967
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:412131
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001 32/115 (28%)
CUB 1100..1211 CDD:238001 32/110 (29%)
CUB 1216..1330 CDD:238001 42/120 (35%)
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:412131
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:412131
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:412131
CUB 3623..3733 CDD:238001
cdcp2XP_068069672.1 CUB 26..132 CDD:395345 29/109 (27%)
CUB 141..252 CDD:238001 32/112 (29%)
CUB 263..368 CDD:238001 38/110 (35%)
Blue background indicates that the domain is not in the aligned region.

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