DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and CG10280

DIOPT Version :10

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_001246942.1 Gene:CG10280 / 40740 FlyBaseID:FBgn0037395 Length:362 Species:Drosophila melanogaster


Alignment Length:388 Identity:74/388 - (19%)
Similarity:117/388 - (30%) Gaps:108/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   744 CGGVYTAKEGTISESSTANTEPGGVSCEY---EIHLAVGEQVVIQFARL---------------- 789
            ||.....|:.:.....||...|..:.|..   .:.|.|..||.:....|                
  Fly     5 CGVERVGKQRSNGNIVTAKPNPSSIMCAQLSGSVVLLVQLQVAVLLVALLVLSATTLSESAKLPV 69

  Fly   790 ----------ELDPLDCLEVL----DITDEGGSILQEKICGSDASRLNPPTFTSEFNRLKIKFYA 840
                      |.:.....|||    |..|..|..:.:...|.|.....|..|..:   :.|..|.
  Fly    70 RQYPAGVDFFEHEFTSVAEVLKPLSDEYDPYGPDIGDDDLGIDDPETMPRLFQGD---IAIDPYT 131

  Fly   841 RAGSFQLNYRMACDYKLNNEQ----GTI---TSPGYPNLTRSDRICTYTISTATNTVISLKRIDF 898
                 .:..|:..:...:.::    |||   .||.|.|..|.      .|..|..|..||..:.|
  Fly   132 -----YITLRLGVNPMRHPKRLWPNGTIPFEISPRYANQERQ------AIIQAVKTFNSLTCVHF 185

  Fly   899 QLTNGESDD--------------------------------DDND-ECLTTNLRINDGLNRKILG 930
            ...:||.||                                |:|. .|.::..||...|...| |
  Fly   186 VPYDGEVDDYLLIEPPLEGPQGCWSYVGRRGGEQVVSLQRPDENSAHCFSSEGRIMHELMHAI-G 249

  Fly   931 PYCGKNQPEENFVSETNYLQLHLSTDVDSMGRGFKFEYRALATGNDKCGGVHTRSGDHIRLPVHD 995
            .|     .|::.....|::::|....|....:.||..        .|..|.:....|:..:..:.
  Fly   250 IY-----HEQSRADRDNFVKIHWDNIVPRFRKNFKLV--------SKKKGKYAFDYDYNSVMHYG 301

  Fly   996 DSYAGEATCYWVIMAPANKAIRLHWNSFSLENAVDCIYDYLEIYDSLGAQVNDERSKPLAKYC 1058
            :.|..:.......|.|....:|:  ......:.:||    |:|.:..|. :...|:|....:|
  Fly   302 EFYFSKRKGEKPTMTPLQPGVRI--GQRKTISKIDC----LKINELYGC-LQGRRAKMYRSFC 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 cubilin_NTD 21..149 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_CA 324..367 CDD:214542
EGF 430..457 CDD:394967
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:412131 25/137 (18%)
CUB 853..970 CDD:238001 33/156 (21%)
CUB 978..1094 CDD:238001 14/81 (17%)
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:412131
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:412131
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:412131
CUB 3623..3733 CDD:238001
CG10280NP_001246942.1 ZnMc_astacin_like 151..342 CDD:239807 44/216 (20%)
Blue background indicates that the domain is not in the aligned region.

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