DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and CG15254

DIOPT Version :9

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_001285959.1 Gene:CG15254 / 34915 FlyBaseID:FBgn0028949 Length:254 Species:Drosophila melanogaster


Alignment Length:308 Identity:50/308 - (16%)
Similarity:101/308 - (32%) Gaps:118/308 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1689 RQAARNESCLWVFQAVEPNKRIIFTPTHVKLREDANQQYPTEGDCLNVGVKIYEGTEPQGTPRLK 1753
            |...|||:..|      || ||::    ..:..|.:.::...   :..|::|.|.:.        
  Fly    49 RNGLRNETFRW------PN-RIVY----YYINRDIDTEHRNH---ILRGIRIIEQSS-------- 91

  Fly  1754 FCRSHPPALISNGQALTVSVPLQLVEEFQGHYMTMDTSCGSIYNALSGKFTSPYYPASYPPNIEC 1818
             |.....|...                 |.:|:.:.:..|..|:.:           .|...::.
  Fly    92 -CLVFKEATTD-----------------QEYYVNVTSEAGGCYSYV-----------GYRNRVQQ 127

  Fly  1819 L----WLLEAS---MGNSLSLTLESMDLEKSESC-NR-DYLEVREESESGQLIGVYCGNEVPGVI 1874
            |    :.|:..   :|..:...|.::.....:|. || ||:.:.||                   
  Fly   128 LNLQTYALDTGCFRLGTIVHEFLHALGFYHQQSTWNRDDYVRIAEE------------------- 173

  Fly  1875 HSRGAIWMKFKSDDDNVGEGFMASYNYEHHNELNGTEGTIESPHFPSKFQDPVPYSWRITVDKEY 1939
                           |:.||...::| ::.||      |:|....|..:...:.|:         
  Fly   174 ---------------NITEGTEGNFN-KYDNE------TVEDYGEPYDYSSVLHYT--------- 207

  Fly  1940 VVAISLLYLRDLDQPHLNFYDGYSDI-GARIEVTDPDETIISSTNVVY 1986
                :..:.::.:...:...:|..:: |.|:::|..|   |:..||:|
  Fly   208 ----AYAFSKNGEMTIVPLQEGAEELMGQRLQMTQSD---INKLNVMY 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_3 328..366 CDD:289699
EGF 430..457 CDD:278437
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:294042
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001 17/115 (15%)
CUB 1910..1998 CDD:294042 13/78 (17%)
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:294042
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:294042
CUB 3623..3733 CDD:238001
CG15254NP_001285959.1 Astacin 58..251 CDD:279708 46/299 (15%)
ZnMc_astacin_like 61..248 CDD:239807 43/288 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444887
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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