DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and CG6696

DIOPT Version :9

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_573318.1 Gene:CG6696 / 32856 FlyBaseID:FBgn0030947 Length:324 Species:Drosophila melanogaster


Alignment Length:352 Identity:73/352 - (20%)
Similarity:121/352 - (34%) Gaps:122/352 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  2657 SRPLHCSYKVVPP-----SNSTLLIRVKEYNTTSVMMW----NTHM---CALLSP--LKFNRLEQ 2707
            :||      .|||     :|..:|   :.:|:.:...|    :|::   |.|...  :....|.:
  Fly    40 ARP------AVPPAARWGANMQML---RRHNSPAFNFWTEDSDTNIWEHCGLFEGDIMLHRELLR 95

  Fly  2708 EEELMERILCDYQSPAPGKPLPSIRLPFPIQLVVSASARNAMTNLVL-----SYSTQSCGGVIIL 2767
            ...|.||:           ..|...:||    .:.....||...:|:     .|..::|......
  Fly    96 NGLLNERL-----------TWPEAAVPF----YIDPQDFNANQTMVILKAFKEYHDRTCIRFRPY 145

  Fly  2768 EPGDN---MTVHQPSGMVSAAGAIDCAWAIGPYTDASGEDEVLVPQDIQLEVSVYNVNLPAPSPS 2829
            |.||.   :.....||..|:.|.            .||.             .|.|:|.|     
  Fly   146 EQGDKHWLLIKGNYSGCWSSVGR------------RSGG-------------QVLNLNTP----- 180

  Fly  2830 AQSPEAPCLHHYLKVYNGPDQNSPSLGLFCNQATAVNMVVERGLF--------LEYHSDSFSANA 2886
                  .|:.|.:.|:    :...:||.:..|:     ..||..:        |:.|:.:|:..|
  Fly   181 ------KCVTHGVVVH----ELLHALGFYHQQS-----ATERDEYVKINWENILDGHAHNFNKYA 230

  Fly  2887 -----TFNVSIKYGSGCGGKLVYPYRAIDFAEQYKNNVECIWEVEATMGYHIGLTFQ-----GRF 2941
                 .|.|...|.|      |..|.:..|::..|..:|.: :..|::|...||:.:     ...
  Fly   231 RTHITNFGVEYDYQS------VMHYSSRAFSKNGKATIEPL-DPYASLGQRRGLSDKDVSKLNEM 288

  Fly  2942 YIEDSPGCTKDYLLVQQRNETTGNWTD 2968
            |.:|   |::||||...|   .||:.|
  Fly   289 YEQD---CSEDYLLNFDR---FGNYID 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_3 328..366 CDD:289699
EGF 430..457 CDD:278437
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:294042
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:294042
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:294042 14/71 (20%)
CUB 2898..3008 CDD:238001 20/76 (26%)
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:294042
CUB 3623..3733 CDD:238001
CG6696NP_573318.1 Astacin 104..295 CDD:279708 49/249 (20%)
ZnMc_astacin_like 110..289 CDD:239807 45/234 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444882
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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