DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and Mfrp

DIOPT Version :9

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_667337.1 Gene:Mfrp / 259172 MGIID:2385957 Length:584 Species:Mus musculus


Alignment Length:269 Identity:80/269 - (29%)
Similarity:113/269 - (42%) Gaps:49/269 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1439 CMEELRGTFGFFQSPNYPKMYPNNLECYWLITVEQDSAIELTINNIDLEDSPNCTKDALTVSNHK 1503
            |...|.|..|||.|||||.:||....|.|.|.|.....|:|.|..:.:|....|..|.|.:.:..
Mouse   150 CGGLLPGPSGFFSSPNYPDLYPPLSHCVWHIQVAAGQTIQLKIQALSIESMLTCLFDRLEIISEP 214

  Fly  1504 NSVEVHERHCGSTTKLVITSSGHRLHVRFISDNSHNGLGFEATYRTV------------------ 1550
            ....:  |.||.|....:.::...|.|.|:|||...|.||:|.|:.|                  
Mouse   215 TGPLL--RVCGKTPPATLNTNTSHLRVSFVSDNDVEGSGFQAWYQAVAPGHWSCAHNEFHCDLLL 277

  Fly  1551 --------------------------KATCGGKLTARNGVIESPNYPLNYPAHSRCEWQVEVSQH 1589
                                      ...|||.||...||..:||||.:||....|.|.:||...
Mouse   278 CLKRDSVCDGITECADGSDEANCSAKTLGCGGNLTGLYGVFSTPNYPQHYPHQQLCTWYIEVPVG 342

  Fly  1590 HQIVFEMADLNLESGYDCNWDYLEAYDLTEDDTEGERLFKVCGDETEDDKLLSSSSNMAVVRFIS 1654
            :.|..|..:.:||:..:|.:||:|.|:.:...| ...|.:.||.|...: ::||...:||: |.:
Mouse   343 YGIRLEFHNFSLEAQAECKFDYVEVYEASNLGT-FSFLGRFCGAEPPLN-VVSSMHQLAVI-FKT 404

  Fly  1655 DDSVSKKGF 1663
            |..:|..||
Mouse   405 DLGISSGGF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_3 328..366 CDD:289699
EGF 430..457 CDD:278437
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:294042
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001 36/102 (35%)
CUB 1554..1667 CDD:238001 40/110 (36%)
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:294042
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:294042
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:294042
CUB 3623..3733 CDD:238001
MfrpNP_667337.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..140
CUB 150..258 CDD:238001 39/109 (36%)
LDLa 266..300 CDD:238060 0/33 (0%)
CUB 307..419 CDD:238001 40/110 (36%)
Fz 471..573 CDD:279700
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4292
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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