DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn and CDCP2

DIOPT Version :10

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_001340584.1 Gene:CDCP2 / 200008 HGNCID:27297 Length:540 Species:Homo sapiens


Alignment Length:393 Identity:113/393 - (28%)
Similarity:179/393 - (45%) Gaps:44/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   960 MGRGFKFEYRALATGNDKCGGVHTRSGDHIRLPVHDDSYAGEATCYWVIMAPANKAIRLHWNSFS 1024
            :|.|.    :|.|....|||||.:....:...|.....|.....|.|:|:.....::.|.:::|.
Human    16 LGPGL----QAQAMEGVKCGGVLSAPSGNFSSPNFPRLYPYNTECSWLIVVAEGSSVLLTFHAFD 76

  Fly  1025 LENAVDCIYDYLEIYDSLGAQVNDERSKPLAKYCGNSVPEDLLSHSRQLVLKFVSDYSESDGGFD 1089
            ||....|.:|:||||:  ||  :.::...|.::||...|....|....:.:.|.||...:..||.
Human    77 LEYHDTCSFDFLEIYN--GA--SPDKGNLLGRFCGKVPPPPFTSSWHVMSVIFHSDKHVASHGFS 137

  Fly  1090 LTYTFEDRAKCGGHIHASSGELTSPEYPANYSAGLDCDWHLTGTIDHLLEIQVENFELEQSPNCS 1154
            ..|   .:..|||.:...||.|||||||.||...::|.|.:.......:::...:|::|.:..|:
Human   138 AGY---QKDVCGGVLTGLSGVLTSPEYPNNYPNSMECHWVIRAAGPAHVKLVFVDFQVEGNEECT 199

  Fly  1155 ADYLEVRNGGGTDSPLIG-RFCGRDIPARIPGFSHEMRLILHTDSAINGRGFRLRWRIFAFGCGG 1218
            .||:.|..|.|   |..| .:||...|..:....||::::..:|..|.||||:..:  |:..|..
Human   200 YDYVAVLGGPG---PTRGHHYCGSTRPPTLVSLGHELQVVFKSDFNIGGRGFKAYY--FSGECQE 259

  Fly  1219 SLRSNMGAISSPRYPNSYPNMAHCEWRISLHPGSGISLLIEDLELEG----LSNCYYDSVKIYTG 1279
            ...:..|..|||:||:||||...|.|.|.|.||..:.:...||:||.    ...|.:|.:..:.|
Human   260 VYMAMRGNFSSPQYPSSYPNNIRCHWTIRLPPGYQVKVFFLDLDLEEPNSLTKTCDFDHLAAFDG 324

  Fly  1280 IKLPNQSPCKVLCKDDDLHN-------PLIQLENNKGTIVFDSDASNTFRGFRISY------KAN 1331
            ..  .::|.        |.|       |.:...:|:..::..:|.|.|.|||.::|      ..:
Human   325 AS--EEAPL--------LGNWCGHHLPPPVTSSHNQLLLLLHTDRSTTRRGFSVAYIGVVPMNVS 379

  Fly  1332 CIR 1334
            |.|
Human   380 CSR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 cubilin_NTD 21..149 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_CA 324..367 CDD:214542
EGF 430..457 CDD:394967
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:412131
CUB 853..970 CDD:238001 2/9 (22%)
CUB 978..1094 CDD:238001 32/115 (28%)
CUB 1100..1211 CDD:238001 37/111 (33%)
CUB 1216..1330 CDD:238001 36/130 (28%)
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:412131
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:412131
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:412131
CUB 3623..3733 CDD:238001
CDCP2NP_001340584.1 CUB 30..141 CDD:238001 32/117 (27%)
CUB 145..254 CDD:238001 37/113 (33%)
CUB 257..370 CDD:395345 35/122 (29%)
Blue background indicates that the domain is not in the aligned region.

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