DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cubn and CDCP2

DIOPT Version :9

Sequence 1:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster
Sequence 2:NP_001340584.1 Gene:CDCP2 / 200008 HGNCID:27297 Length:540 Species:Homo sapiens


Alignment Length:393 Identity:113/393 - (28%)
Similarity:179/393 - (45%) Gaps:44/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   960 MGRGFKFEYRALATGNDKCGGVHTRSGDHIRLPVHDDSYAGEATCYWVIMAPANKAIRLHWNSFS 1024
            :|.|.    :|.|....|||||.:....:...|.....|.....|.|:|:.....::.|.:::|.
Human    16 LGPGL----QAQAMEGVKCGGVLSAPSGNFSSPNFPRLYPYNTECSWLIVVAEGSSVLLTFHAFD 76

  Fly  1025 LENAVDCIYDYLEIYDSLGAQVNDERSKPLAKYCGNSVPEDLLSHSRQLVLKFVSDYSESDGGFD 1089
            ||....|.:|:||||:  ||  :.::...|.::||...|....|....:.:.|.||...:..||.
Human    77 LEYHDTCSFDFLEIYN--GA--SPDKGNLLGRFCGKVPPPPFTSSWHVMSVIFHSDKHVASHGFS 137

  Fly  1090 LTYTFEDRAKCGGHIHASSGELTSPEYPANYSAGLDCDWHLTGTIDHLLEIQVENFELEQSPNCS 1154
            ..|   .:..|||.:...||.|||||||.||...::|.|.:.......:::...:|::|.:..|:
Human   138 AGY---QKDVCGGVLTGLSGVLTSPEYPNNYPNSMECHWVIRAAGPAHVKLVFVDFQVEGNEECT 199

  Fly  1155 ADYLEVRNGGGTDSPLIG-RFCGRDIPARIPGFSHEMRLILHTDSAINGRGFRLRWRIFAFGCGG 1218
            .||:.|..|.|   |..| .:||...|..:....||::::..:|..|.||||:..:  |:..|..
Human   200 YDYVAVLGGPG---PTRGHHYCGSTRPPTLVSLGHELQVVFKSDFNIGGRGFKAYY--FSGECQE 259

  Fly  1219 SLRSNMGAISSPRYPNSYPNMAHCEWRISLHPGSGISLLIEDLELEG----LSNCYYDSVKIYTG 1279
            ...:..|..|||:||:||||...|.|.|.|.||..:.:...||:||.    ...|.:|.:..:.|
Human   260 VYMAMRGNFSSPQYPSSYPNNIRCHWTIRLPPGYQVKVFFLDLDLEEPNSLTKTCDFDHLAAFDG 324

  Fly  1280 IKLPNQSPCKVLCKDDDLHN-------PLIQLENNKGTIVFDSDASNTFRGFRISY------KAN 1331
            ..  .::|.        |.|       |.:...:|:..::..:|.|.|.|||.::|      ..:
Human   325 AS--EEAPL--------LGNWCGHHLPPPVTSSHNQLLLLLHTDRSTTRRGFSVAYIGVVPMNVS 379

  Fly  1332 CIR 1334
            |.|
Human   380 CSR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CubnNP_727348.2 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_3 328..366 CDD:289699
EGF 430..457 CDD:278437
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:294042
CUB 853..970 CDD:238001 2/9 (22%)
CUB 978..1094 CDD:238001 32/115 (28%)
CUB 1100..1211 CDD:238001 37/111 (33%)
CUB 1216..1330 CDD:238001 36/130 (28%)
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:294042
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:294042
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:294042
CUB 3623..3733 CDD:238001
CDCP2NP_001340584.1 CUB 30..141 CDD:238001 32/117 (27%)
CUB 145..254 CDD:238001 37/113 (33%)
CUB 257..370 CDD:278839 35/122 (29%)
Zona_pellucida 380..>463 CDD:332579 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4105at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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