DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0320 and ssr1

DIOPT Version :9

Sequence 1:NP_001285058.1 Gene:l(1)G0320 / 326234 FlyBaseID:FBgn0028327 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_012820211.1 Gene:ssr1 / 549666 XenbaseID:XB-GENE-492166 Length:291 Species:Xenopus tropicalis


Alignment Length:314 Identity:127/314 - (40%)
Similarity:189/314 - (60%) Gaps:39/314 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRHLMFLMLMVLPIVICTFSAPNKFGAYAA----EAVEDDLVDVEGEEGAVTGEDA-------EA 54
            :|:|:.|:|:..|:.:...|......|..|    ||::|.:|:.:.:|..|..:|.       |.
 Frog     4 LRNLLLLVLLAFPVTLIGNSKGPLVAAQDATEDEEAIDDSVVEDDDDEAEVEEDDTTDLTEEKEE 68

  Fly    55 DEDSDTGS-SSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRY 118
            :||..:|. .:||||||.:||.|     |:  |.|....|:||:||||||.|.|::|:::|||||
 Frog    69 EEDLSSGEPKASPNADTTILFVK-----GE--DFPANDIVKFLVGFTNKGPENFIVESLDASFRY 126

  Fly   119 PMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFN 183
            |.|:.::||||:|:..|..|.|..::|..|:|:|::...||||||.|.|.|:||||..:.:||||
 Frog   127 PQDYQFYIQNFTALPLNTVVPPQKQATFEYSFIPAEPMGGRPFGLVINLNYKDANGNAFQDAVFN 191

  Fly   184 ETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTID 248
            :||.|:|.::||||||.|:|:.|.|: .||:::|...|| .|.||||.|.|  :|.||:|.:.:|
 Frog   192 QTVTITEKEDGLDGETIFMYLFLGGL-GLLVIVGLHQLL-ESRKRKRPAQK--VEMGTSNQNDVD 252

  Fly   249 YDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSAGDD 302
            ..|:|.|||..:.    :|:..|.||:            :||::|..||.||.|
 Frog   253 MSWIPPETLSQIM----QSRRDKASPR------------RSPRKRGPKRPAGSD 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0320NP_001285058.1 TRAP_alpha 4..297 CDD:281839 121/304 (40%)
ssr1XP_012820211.1 TRAP_alpha 14..285 CDD:367716 118/297 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 215 1.000 Domainoid score I2681
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2368
Inparanoid 1 1.050 218 1.000 Inparanoid score I3480
OMA 1 1.010 - - QHG52580
OrthoDB 1 1.010 - - D1349929at2759
OrthoFinder 1 1.000 - - FOG0005711
OrthoInspector 1 1.000 - - oto102703
Panther 1 1.100 - - LDO PTHR12924
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4191
SonicParanoid 1 1.000 - - X5414
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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