DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0320 and ssr1

DIOPT Version :10

Sequence 1:NP_572567.1 Gene:l(1)G0320 / 326234 FlyBaseID:FBgn0028327 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_073796220.1 Gene:ssr1 / 373100 ZFINID:ZDB-GENE-030826-28 Length:295 Species:Danio rerio


Alignment Length:320 Identity:133/320 - (41%)
Similarity:189/320 - (59%) Gaps:47/320 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRHLMFLMLMVLPIVIC----TFSAPNKFGAYAAEAV------------EDDLVDVEGEEGA-VT 48
            ::.|:.|:|:..|..:.    ..||.:  .....|||            |||..:||.:|.. :|
Zfish     4 LQKLLLLLLLAFPATLMLKGPVVSAQD--ATEEEEAVDEDAGDDVLAEDEDDEAEVEDDENTELT 66

  Fly    49 GEDAEADEDSDTGS-SSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETV 112
            .|..|.:|::..|. .:||||||.:||.|     |:  |.|....|:||:||:|||:|.||:|::
Zfish    67 EEKEEEEEEALVGEVKASPNADTTILFVK-----GE--DFPANNIVKFLLGFSNKGSENFVVESL 124

  Fly   113 EASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQY 177
            :||||||.||.::||||:|:.....|.|..::|..|:|:|::...||||||.|.|.|||.:|..:
Zfish   125 DASFRYPQDFQFYIQNFTALQLGTLVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYRDDSGNVF 189

  Fly   178 NEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTA 242
            .:||||:||.|:|.::||||||.|:||.|:|: .||||||...|| .|.||:|.|||  :|.||:
Zfish   190 QDAVFNQTVTITEREDGLDGETIFMYVFLSGL-GLLLVIGLHQLL-ESRKRRRPAAK--VEMGTS 250

  Fly   243 NDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSAGDD 302
            |.:.:|..|:|||||..:.    .|:..|.||:            :||::|..|||||.|
Zfish   251 NHNDVDMSWIPQETLNQIM----ASRRDKASPR------------RSPRKRTQKRSAGSD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0320NP_572567.1 TRAP_alpha 8..302 CDD:461085 130/311 (42%)
ssr1XP_073796220.1 None

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