DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0320 and Ssr1

DIOPT Version :9

Sequence 1:NP_001285058.1 Gene:l(1)G0320 / 326234 FlyBaseID:FBgn0028327 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001347771.1 Gene:Ssr1 / 107513 MGIID:105082 Length:291 Species:Mus musculus


Alignment Length:311 Identity:124/311 - (39%)
Similarity:182/311 - (58%) Gaps:39/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LMFLMLMVLPIVICTFSAPNKFGAYA------AEAVEDDLVDVEGEEGAVTGED----AEADEDS 58
            |:.|.|:..|..:.....|....|.|      .|.|||.:::.|.:|..|..::    ||..|:.
Mouse     7 LLLLFLLAFPAAVLLRGGPGGSLALAQDPTEDEEIVEDSIIEDEDDEAEVEEDEPTDLAEDKEEE 71

  Fly    59 DTGS--SSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMD 121
            |..|  .:||:|||.:||.|     |:  |.|....|:||:||||||.|:|::|:::||||||.|
Mouse    72 DVSSEPEASPSADTTILFVK-----GE--DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQD 129

  Fly   122 FNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETV 186
            :.::||||:|:..|..|.|..::|..|:|:|::...||||||.|.|.|:|.||..:.:||||:||
Mouse   130 YQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTV 194

  Fly   187 LISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDW 251
            .:.|.::||||||.|:|:.|||: .||:|:|...|| .|.||||...|  :|.||::.:.:|..|
Mouse   195 TVIEREDGLDGETIFMYMFLAGL-GLLVVVGLHQLL-ESRKRKRPIQK--VEMGTSSQNDVDMSW 255

  Fly   252 VPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSAGDD 302
            :|||||..:.    :|:..|.||:            :.|::|..|||.|.|
Mouse   256 IPQETLNQIM----QSRRDKASPR------------RQPRKRAQKRSVGSD 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0320NP_001285058.1 TRAP_alpha 4..297 CDD:281839 119/304 (39%)
Ssr1NP_001347771.1 TRAP_alpha 21..285 CDD:309139 115/290 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849079
Domainoid 1 1.000 208 1.000 Domainoid score I2868
eggNOG 1 0.900 - - E1_KOG1631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2368
Inparanoid 1 1.050 208 1.000 Inparanoid score I3693
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52580
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005711
OrthoInspector 1 1.000 - - oto92395
orthoMCL 1 0.900 - - OOG6_103262
Panther 1 1.100 - - LDO PTHR12924
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4191
SonicParanoid 1 1.000 - - X5414
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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