DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango5 and Vmp1

DIOPT Version :9

Sequence 1:NP_001162716.1 Gene:Tango5 / 326232 FlyBaseID:FBgn0052675 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001343460.1 Gene:Vmp1 / 75909 MGIID:1923159 Length:406 Species:Mus musculus


Alignment Length:410 Identity:216/410 - (52%)
Similarity:291/410 - (70%) Gaps:23/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 MQETGSSATSLLAAGGKAKKN---------QKDKQRERERLERGQLVLWRRPLQTTKYCGLELFT 158
            |.|.|.:......|..|.:.|         .:.|:|:||  ||..:||||:||.|.:|..||...
Mouse     1 MAENGKNCDQRRIAMSKDQHNGSLTDPSSVHEKKRRDRE--ERQNIVLWRQPLITLQYFSLETLV 63

  Fly   159 LLRTWSTRLLQQRLLLATLIVLSIVFSVIYKIDGPHQLAIEFVRRNTWFFVYWLGLGVLSSVGLG 223
            :|:.|:::|..::.::.:.::|.......|.::|.||..::.:.:....:.||:|||:|||||||
Mouse    64 VLKEWTSKLWHRQSIVVSFLLLLAALVATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLG 128

  Fly   224 TGLHTFLLYLGPHIASVTLAAYECNSLRFPQPPYPDDIICPEEPYDKHVPNIWSIMSKVRLEAFL 288
            ||||||||||||||||||||||||||:.||:|||||.||||||...:...::|||:||||:||.:
Mouse   129 TGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDQIICPEEEGAEGAISLWSIISKVRIEACM 193

  Fly   289 WGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEAL--NAKRHQKNLSMMDRGKLFMERVVER 351
            ||.|||:|||||||||:||||||.:|:| ||..|||.:  :|:..|   ....|.||.::::|::
Mouse   194 WGIGTAIGELPPYFMARAARLSGAEPDD-EEYQEFEEMLEHAEAAQ---DFASRAKLAVQKLVQK 254

  Fly   352 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAVIKMHIQKIFVIIAFNETLIER 416
            |||||||||||||||||||||||||||||||||||||||||||:|||||||||||:.|::.::|:
Mouse   255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSKHIVEQ 319

  Fly   417 AVDLLATLPVLGHKLQEPFKSFLKNQKQRLHRQQRGAAGATTGAGDSGNLLSRIFETFVIGMVCY 481
            .|..:..:|.:|..||:||:.:|:.|:|:||  .|..||...|.    |.||.:||..|:.||||
Mouse   320 MVTFIGAVPGIGPSLQKPFQEYLEAQRQKLH--HRSEAGTPQGE----NWLSWMFEKLVVAMVCY 378

  Fly   482 FVVSIVNSLAQSYHKRLHKK 501
            ||:||:||:||:|.||:.::
Mouse   379 FVLSIINSMAQNYAKRIQQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango5NP_001162716.1 SNARE_assoc <346..395 CDD:294297 43/48 (90%)
Vmp1NP_001343460.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 7/35 (20%)
VTT domain. /evidence=ECO:0000250|UniProtKB:Q96GC9 173..316 97/146 (66%)
SNARE_assoc <247..298 CDD:412374 43/50 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850632
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1109
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23686
Inparanoid 1 1.050 429 1.000 Inparanoid score I1719
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54823
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003786
OrthoInspector 1 1.000 - - oto94099
orthoMCL 1 0.900 - - OOG6_103371
Panther 1 1.100 - - LDO PTHR10281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2897
SonicParanoid 1 1.000 - - X2641
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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