DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango5 and vmp1

DIOPT Version :9

Sequence 1:NP_001162716.1 Gene:Tango5 / 326232 FlyBaseID:FBgn0052675 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001007877.1 Gene:vmp1 / 493262 XenbaseID:XB-GENE-1000954 Length:406 Species:Xenopus tropicalis


Alignment Length:409 Identity:218/409 - (53%)
Similarity:294/409 - (71%) Gaps:15/409 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 MQETGSSATSLLAAGGKAKKNQK-------DKQRERERLERGQLVLWRRPLQTTKYCGLELFTLL 160
            |.|.|:..........|.:.|..       ..::.|:|.||..:||||:||.|.:|..||:...|
 Frog     1 MAENGTDCEQRRVGMAKEQNNGSFQDPSFLSDRKSRDREERQSIVLWRKPLITLQYFILEVLITL 65

  Fly   161 RTWSTRLLQQRLLLATLIVLSIVFSVIYKIDGPHQLAIEFVRRNTWFFVYWLGLGVLSSVGLGTG 225
            :.||.||..:|:::.::::|..|.||:|.|:|.||..:::|.:...:..||:|||:|||||||||
 Frog    66 KDWSIRLWHRRMMVVSVLLLLAVLSVVYYIEGTHQQYVQYVEKKCLWCAYWVGLGILSSVGLGTG 130

  Fly   226 LHTFLLYLGPHIASVTLAAYECNSLRFPQPPYPDDIICPEEPYDKHVPNIWSIMSKVRLEAFLWG 290
            ||||||||||||||||:|||||||:.||:|||||:||||:|...:...::|:|:|||||||.:||
 Frog   131 LHTFLLYLGPHIASVTIAAYECNSVNFPEPPYPDEIICPDEEGTEGAISLWTIISKVRLEACMWG 195

  Fly   291 AGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRHQKNLSMMDRGKLFMERVVERVGFF 355
            ||||:|||||||||:||||||.:.:| ||.||||.: .:..|.......|.||.::.:|::|||.
 Frog   196 AGTAIGELPPYFMARAARLSGVETDD-EEYAEFEEM-LEHAQTAQDFATRAKLAVQNLVQKVGFL 258

  Fly   356 GILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAVIKMHIQKIFVIIAFNETLIERAVDL 420
            |||||||||||||||||||||||||||||||||||||||:|||||||:||||.|::.::|:.|.|
 Frog   259 GILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIITFSKHIVEQMVSL 323

  Fly   421 LATLPVLGHKLQEPFKSFLKNQKQRLHRQQRGAAGATTGAGDSGNLLSRIFETFVIGMVCYFVVS 485
            :..:|.:|..||:||:.:|:.|:::||.::      .:||..|.|.||..||..||.||.||::|
 Frog   324 IGVIPSIGPSLQKPFQEYLEAQRKKLHHKE------DSGAPQSENWLSWAFEKLVIIMVFYFILS 382

  Fly   486 IVNSLAQSYHKRLHKKPAS 504
            |:||:||||.||:.::..|
 Frog   383 IINSMAQSYAKRVQQRKLS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango5NP_001162716.1 SNARE_assoc <346..395 CDD:294297 42/48 (88%)
vmp1NP_001007877.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 5/33 (15%)
VTT domain. /evidence=ECO:0000250|UniProtKB:Q96GC9 173..316 96/144 (67%)
SNARE_assoc <247..298 CDD:294297 42/50 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 438 1.000 Domainoid score I550
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23686
Inparanoid 1 1.050 438 1.000 Inparanoid score I1633
OMA 1 1.010 - - QHG54823
OrthoDB 1 1.010 - - D468248at33208
OrthoFinder 1 1.000 - - FOG0003786
OrthoInspector 1 1.000 - - otm48841
Panther 1 1.100 - - LDO PTHR10281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2897
SonicParanoid 1 1.000 - - X2641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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