DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fa and Rab19

DIOPT Version :10

Sequence 1:NP_727471.1 Gene:Rab9Fa / 326230 FlyBaseID:FBgn0052671 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:174 Identity:57/174 - (32%)
Similarity:97/174 - (55%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |..||:|::|||.|||||::..|....::...::|:|:|....|:|. |.:..:| |||||:..|
  Rat    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEI-DGKKVKM-QVWDTAGQE 77

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSM 134
            ||:.:..:..||||..::.||:|...:|:::..|:.||.:.....:.::|:|||||....|.|..
  Rat    78 RFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLF 142

  Fly   135 AQGFNYAHRQS-ICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVH 177
            ......|.:.. :...|.|||..||:.::|..:|.::.....:|
  Rat   143 EDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FaNP_727471.1 Rab 8..167 CDD:206640 54/159 (34%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 56/165 (34%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 2/14 (14%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 3/14 (21%)

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