DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ARP7

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_015359.1 Gene:ARP7 / 856146 SGDID:S000006238 Length:477 Species:Saccharomyces cerevisiae


Alignment Length:493 Identity:95/493 - (19%)
Similarity:179/493 - (36%) Gaps:150/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVG-----DE 65
            |..:|..||:.....|::....|..|.||    ..|:..::.|:.|        .:.|     |.
Yeast     5 RKCVVIHNGSHRTVAGFSNVELPQCIIPS----SYIKRTDEGGEAE--------FIFGTYNMIDA 57

  Fly    66 ASQLRSLLEVSYPM--ENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNR--- 125
            |::.|:..|| |.:  ..|:..|||.:...|.|.: ..::.:.|....:::|.|..|...:.   
Yeast    58 AAEKRNGDEV-YTLVDSQGLPYNWDALEMQWRYLY-DTQLKVSPEELPLVITMPATNGKPDMAIL 120

  Fly   126 EKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIA 190
            |:..|:.|:|.......|.|:.:....:.|..|..|||.|....::.|:.:...:.:...|....
Yeast   121 ERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFG 185

  Fly   191 GRDITRYLI--KL--LLLRGYAFNHSAD-------------------------------FETVRI 220
            | |...:.:  :|  |:.......:.||                               ||..|.
Yeast   186 G-DFLDFQVHERLAPLIKEENDMENMADEQKRSTDVWYEASTWIQQFKSTMLQVSEKDLFELERY 249

  Fly   221 MKEKLCYIGYDI---------EMEQRLALETTVLVESYTLPDGRVIKVGG--------------- 261
            .||:.     ||         :|:|:  |:.|.|..|   |:..:::...               
Yeast   250 YKEQA-----DIYAKQQEQLKQMDQQ--LQYTALTGS---PNNPLVQKKNFLFKPLNKTLTLDLK 304

  Fly   262 ERFEAPEALFQPHLINVE-------GPGIAE-------------------------------LAF 288
            |.::..|.||:|.||:.:       ||.:|:                               :..
Yeast   305 ECYQFAEYLFKPQLISDKFSPEDGLGPLMAKSVKKAGASINSMKANTSTNPNGLGTSHINTNVGD 369

  Fly   289 NTIQAADIDIRPE-----LYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKF--K 346
            |...|:..:|.||     |..:::::|.:::..|:..|:.:|:.       ::....||..|  :
Yeast   370 NNSTASSSNISPEQVYSLLLTNVIITGSTSLIEGMEQRIIKELS-------IRFPQYKLTTFANQ 427

  Fly   347 IRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQ 384
            :.::    ||...::|...:|.:.....|.|.||::|:
Yeast   428 VMMD----RKIQGWLGALTMANLPSWSLGKWYSKEDYE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 95/493 (19%)
ARP7NP_015359.1 COG5277 1..471 CDD:227602 95/493 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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