DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ARP8

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_014784.1 Gene:ARP8 / 854309 SGDID:S000005667 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:496 Identity:97/496 - (19%)
Similarity:161/496 - (32%) Gaps:170/496 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDLMVGDEASQLR-----SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPT---NTKILL 114
            |.|...||...:|     ....|..|....:.....|:..:.::....:.:::.||   ..|::|
Yeast   388 DALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVL 452

  Fly   115 TEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQGL-ISGVVIDSGDGVTHICPVYEEF 178
            ..|.:....:.|..|.|:..:..|.:..|..:::.|.|..|: .|..|::.|...|.|..|.|..
Yeast   453 VIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGT 517

  Fly   179 ALPHLTRRLDIAGRDITRYLIKLLLLRG------------------------------------- 206
            .|.|....||..|.|||| |..|.||:.                                     
Yeast   518 VLEHSAITLDYGGDDITR-LFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQL 581

  Fly   207 YAF-NHSADFETVRIMKEKLCYIGYDIEMEQRLAL---ETTVLVES---------YTLPDGRVIK 258
            |.| |.|.:..|     ||..:..:|..|...|||   :...|:.:         :.||:.|.:.
Yeast   582 YNFMNRSPNQPT-----EKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLF 641

  Fly   259 VGG-------ERFEAPEA---------------LFQPHLI------------NVEGPGIAELAFN 289
            ...       .:||:.|.               :...|.|            |......|.|...
Yeast   642 TNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKA 706

  Fly   290 TIQA-------ADIDIRPELYKHIVLSGGSTMYPGL----------------------------- 318
            .:|:       ||:......|.:|::.|||:..|.|                             
Yeast   707 IVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLT 771

  Fly   319 -------------PSRLEREIKQLYLERVLKNDTEKLAK--------------FKIRIEDPPRRK 356
                         |.:.|.|.||:...::.:...|:|.:              |.:.|..|||  
Yeast   772 KEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPR-- 834

  Fly   357 DM-----VFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQ 392
            ||     ::.|.:|||:: |..:..:::..::...|.::||
Yeast   835 DMNPALIIWKGASVLAQI-KLVEELFITNSDWDVHGSRILQ 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 97/496 (20%)
ARP8NP_014784.1 NBD_sugar-kinase_HSP70_actin 42..>447 CDD:418402 10/58 (17%)
ACTIN 266..878 CDD:214592 97/496 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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