DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ACTRT3

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_115876.3 Gene:ACTRT3 / 84517 HGNCID:24022 Length:372 Species:Homo sapiens


Alignment Length:389 Identity:138/389 - (35%)
Similarity:231/389 - (59%) Gaps:31/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            :|.|||:|.:|.|.||...|..|:|:::||...::....|.:|        |.|||:|...||.|
Human     8 VVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQSRAAQGGLE--------LCVGDQAQDWRSSL 64

  Fly    74 EVSYPMENGVVRNWDDM----CHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFE 134
            .:|||:|.|::.:|:||    .|::||     .:.:.|.:..:|:|||.:||..||:::.|:.||
Human    65 FISYPVERGLITSWEDMEIMWKHIYDY-----NLKLKPCDGPVLITEPALNPLANRQQITEMFFE 124

  Fly   135 KYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLI 199
            ..|..:.|::|||||.|:|.|..:|:|::||.|||...|::|.:.|||..::||:||.|:|.||:
Human   125 HLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLM 189

  Fly   200 KLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERF 264
            .|:...|.....::|.:.|..:||..||:.  :..|:.:|.:...|.:.|.||||:||::..:.|
Human   190 VLMKNHGIMLLSASDRKIVEDIKESFCYVA--MNYEEEMAKKPDCLEKVYQLPDGKVIQLHDQLF 252

  Fly   265 EAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQL 329
            ..|||||.|..:|:|.|||.::.|::|...|..:|...:.:|:|:||||.:|||..||.::|.::
Human   253 SCPEALFSPCHMNLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKV 317

  Fly   330 YLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                       ..|...:::..||.||..|::||::||.::..:| .|::..|::|.|..::.:
Human   318 -----------APANTAVQVIAPPERKISVWMGGSILASLSAFQD-MWITAAEFKEVGPNIVHQ 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 138/387 (36%)
ACTRT3NP_115876.3 ACTIN 7..372 CDD:214592 138/389 (35%)
NBD_sugar-kinase_HSP70_actin 9..372 CDD:302596 138/388 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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