DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ACT8

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_175350.1 Gene:ACT8 / 841347 AraportID:AT1G49240 Length:377 Species:Arabidopsis thaliana


Alignment Length:385 Identity:177/385 - (45%)
Similarity:248/385 - (64%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            ||||||||.||.|:||.:.|..:|||:||||....| .:|      ::..|..|||||...|.:|
plant    10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGV-MVG------MNQKDAYVGDEAQSKRGIL 67

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|:|||.|||||..:|.:|| ..::.|.|....:||||.|:||..|||||.::|||.:..
plant    68 TLKYPIEHGVVSNWDDMEKIWHHTF-YNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .:.|:||||||:|||.|..:|:|:||||||:|..|:||.|:|||...|||:||||:|.||:|:|.
plant   132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILT 196

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPE 268
            .|||.|..:|:.|.||.:||||.::..|.|.|...:..::.:.::|.||||:||.:|.|||..||
plant   197 ERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPE 261

  Fly   269 ALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER 333
            .||||..:.:|..||.|..:|:|...|:|||.:||.:||||||:||:.|:..|:.:||..|    
plant   262 VLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITAL---- 322

  Fly   334 VLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                   ..:..||::..||.||..|:|||::||.::..:. .|:||.||.|.|..::.:
plant   323 -------APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWISKAEYDEAGPGIVHR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 177/383 (46%)
ACT8NP_175350.1 ASKHA_NBD_actin 8..372 CDD:466823 177/381 (46%)

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