DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp2 and DIS1

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_172777.1 Gene:DIS1 / 837876 AraportID:AT1G13180 Length:427 Species:Arabidopsis thaliana


Alignment Length:447 Identity:141/447 - (31%)
Similarity:212/447 - (47%) Gaps:88/447 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSKGRNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVK------------ 53
            ||...|..||.|||||:.|.|:||:..|..|.|::|      |||:....:.|            
plant     1 MDPTSRPAIVIDNGTGYTKMGFAGNVEPCFILPTVV------AVNESFLNQSKSSSKATWQTQHN 59

  Fly    54 -----DLHVDDLMVGDEA---SQLRSLLEVSYPMENGVVRNWDDMCHVWD---YTFGPKKMDIDP 107
                 ||   |..:||||   |:..|...:.||:|:|.|.:||.|...|.   :.:    :..||
plant    60 AGVAADL---DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNY----LRCDP 117

  Fly   108 TNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQGL------ISGVVIDSGD 166
            .:...||||.|:.|.::||...|::||.:.....|||:.:||.| |.|.      ::|||:|.||
plant   118 EDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKCEMTGVVVDVGD 181

  Fly   167 GVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYD 231
            |.||:.||.|.:.:....:.:.|||:|:|.::.:|:..||........|:..|.:||..||...|
plant   182 GATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSD 246

  Fly   232 IEMEQRLALETTVLVESYTLPDGRVIK----------------VGGERFEAPEALFQPHLINVEG 280
            |..|          ...:.....:.||                ||.|||..||..|.|.:.:.:.
plant   247 IVKE----------FNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDF 301

  Fly   281 ----PGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEK 341
                |.:.:   ..||:|.||.|..|||:|||||||||:.....||:|::|::...|||.|:...
plant   302 TTTLPAVID---KCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNART 363

  Fly   342 LAKF-----KIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMS---KQEYQEQGLKV 390
            ..:.     ::.:...|.::..|:.||:||:...:    |:.|   |:||:|.|..:
plant   364 GGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPE----FFASCRTKEEYEEYGASI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 139/442 (31%)
DIS1NP_172777.1 PTZ00280 7..426 CDD:240343 138/441 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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