DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ACT4

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001078769.1 Gene:ACT4 / 836056 AraportID:AT5G59370 Length:377 Species:Arabidopsis thaliana


Alignment Length:392 Identity:178/392 - (45%)
Similarity:252/392 - (64%) Gaps:20/392 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSKGRNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEA 66
            |.:....:|||||||.||.|:||.:.|..:|||:||||....| .:|      :...|..|||||
plant     3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-MVG------MGQKDAYVGDEA 60

  Fly    67 SQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEV 131
            ...|.:|.:.||:|:|:|.|||||..:|.:|| ..::.:.|....:||||.|:||..|||||.::
plant    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124

  Fly   132 MFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITR 196
            |||.:...:.|:||||||:|||.|..:|:|:||||||:|..|:||.:||||...|||:||||:|.
plant   125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189

  Fly   197 YLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGG 261
            :|:|:|..|||:|..:|:.|.||.|||||.||..|.|.|...:..::.:.:|:.||||:||.:|.
plant   190 HLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGA 254

  Fly   262 ERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREI 326
            |||..||.||||.:|.:|.|||.|..:|:|...|:|||.:||.:||||||:||:.|:..|:.:||
plant   255 ERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEI 319

  Fly   327 KQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVL 391
            ..|           ..:..||::..||.||..|:|||::||.::..:. .|::|.||.|.|..::
plant   320 TAL-----------APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWIAKAEYDESGPSIV 372

  Fly   392 QK 393
            .:
plant   373 HR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 177/386 (46%)
ACT4NP_001078769.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 177/390 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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