DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and AT2G42100

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_181740.1 Gene:AT2G42100 / 818810 AraportID:AT2G42100 Length:378 Species:Arabidopsis thaliana


Alignment Length:385 Identity:183/385 - (47%)
Similarity:249/385 - (64%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            ||||||||.||.|:||.:.|..:|||:||||..|.| .:|      :...|..|||||...|.:|
plant    11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGV-MVG------MDEKDTFVGDEAQARRGIL 68

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|:|||.|||||..:|.:|| ..::.::|....|||||.|:||..|||||.::|||.:.|
plant    69 SLKYPIEHGVVSNWDDMEKIWHHTF-YNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .|.||.|||||:||:.|..:|:|:||||||:|..|:||.:||||...|||:||||:|.||.|:::
plant   133 PSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMM 197

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPE 268
            .|||.:..||:.|.||.:|||||||..|.|.|...|..::.:..:|.||||:||.:|.|||..||
plant   198 ERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPE 262

  Fly   269 ALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER 333
            .|||..||.:|..||.|..:|:|...|:|||.:||.:||||||:||:||:..|:.:||..|    
plant   263 VLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINAL---- 323

  Fly   334 VLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                   .....||::..||.||..|::||::||.::.... .|::|.||.|||..::.:
plant   324 -------APPSMKIKVVAPPERKYSVWVGGSILASLSSFAP-MWITKAEYDEQGGAIVHR 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 183/383 (48%)
AT2G42100NP_181740.1 NBD_sugar-kinase_HSP70_actin 6..378 CDD:418402 183/385 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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