DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp2 and Actrt1

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_082790.1 Gene:Actrt1 / 73360 MGIID:1920610 Length:376 Species:Mus musculus


Alignment Length:388 Identity:140/388 - (36%)
Similarity:209/388 - (53%) Gaps:29/388 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            ::.|||:|..|.|.:|...|.|:..|:||.|..       :|.....:.....||:||..:...|
Mouse    12 VIFDNGSGLCKVGISGEIEPRHVINSVVGHPKF-------NIPSARSNRKRYFVGEEAQCMYDGL 69

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|.|:|..||||..:|...| ..::.:.|....:.:|||.:||.:.|||..|:||||:..
Mouse    70 YLHYPIERGLVTRWDDMEKLWKDLF-EWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNV 133

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .:.|:...||..|.|...|:|:|:|||||||...||||.::|||...:|.:||||||.:|.:|||
Mouse   134 PALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLL 198

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYI--GY-DIEMEQRLALETTVLVESYTLPDGRVIKVGGERFE 265
            .:||.|....:...|..:|||||.:  || |.|...:..|      ..||||||..|::.....:
Mouse   199 AKGYTFPCILNKAVVDDIKEKLCTVSLGYKDTEKNCQQFL------RKYTLPDGNTIQMSDHLCQ 257

  Fly   266 APEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLY 330
            .||.||.|..:.:...||:::..|:|...|.||:..|:..||||||:||:|||..||.:|::.|.
Mouse   258 VPEVLFTPDHLGIHDLGISKMVCNSIMNCDTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDLA 322

  Fly   331 LERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
            .|..           .|:|.....|....:|||:|:..:|..:. .|::.::::|.|..|:|:
Mouse   323 FEGT-----------PIKITASSDRCYSAWIGGSVMTSMTTFKQ-MWVTAEDFKEYGAFVVQR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 139/386 (36%)
Actrt1NP_082790.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 137/380 (36%)

Return to query results.
Submit another query.