DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actl9

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_899105.2 Gene:Actl9 / 69481 MGIID:1916731 Length:415 Species:Mus musculus


Alignment Length:387 Identity:119/387 - (30%)
Similarity:210/387 - (54%) Gaps:27/387 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVG-RPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            :|.|.|||..|.|:||.:.||:...:::| :|..:|.....::|.        .:| ||::.|..
Mouse    51 VVIDMGTGTCKVGFAGQSQPTYTVATILGCQPKKQATKDQSELET--------FIG-EAARSRPE 106

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:..|:.||:|.:|:....:|.:.. ...:.:......:|.::||.:|..||||::||.||...
Mouse   107 LRLVKPIRNGIVVDWEAAELIWRHIL-EHDLQVATHEHPLLFSDPPFSPATNREKLVEVAFESLH 170

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.|:|.|:||::||.|.::|:|:|:|.||::..||.:.:.|||..:|||:||..:|.:|.::|
Mouse   171 SPALYVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQGYNLPHAIQRLDLAGNHLTAFLAEML 235

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            |..|::.... |.:.|..:|...||:..|.:.||  |.......:|..|||||.:.:|.|.|:.|
Mouse   236 LGSGFSLQQE-DLDLVENIKHHYCYLAPDFQKEQ--ARPDEECKQSLKLPDGRTVTLGKELFQCP 297

  Fly   268 EALFQPHLINVEGP-GIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYL 331
            |.||.|..|....| |:..:|..::.....::||.:.::::|.|||:::.||..|...|:    |
Mouse   298 ELLFHPPEIPGLSPIGLPAMAEQSLLKVPQELRPHVARNVILCGGSSLFTGLEGRFRAEL----L 358

  Fly   332 ERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
            ..:...|       .:.:...|.|...|:|||::||.:...: ..|:.:::|:|:|.:|:.:
Mouse   359 HSLSPED-------HVVVMAHPNRNLSVWIGGSILASLHAFQ-SCWVLREQYEERGPQVVYR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 119/385 (31%)
Actl9NP_899105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
ACTIN 48..414 CDD:214592 119/387 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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