DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actl11

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_080614.1 Gene:Actl11 / 67722 MGIID:1914972 Length:1207 Species:Mus musculus


Alignment Length:399 Identity:126/399 - (31%)
Similarity:196/399 - (49%) Gaps:65/399 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMV--------GRPMIRAVNKIGDIEVKDLHVDDLMVGDE 65
            ||.|.||||.|||.|..|....:.||.|        |:|..          |...|         
Mouse   861 IVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHPPQGQPQY----------VVPEH--------- 906

  Fly    66 ASQLRSLLEVSYPMEN-GVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMI 129
                   .|.||.:.| |||.:||.:..:|.:.| ..|:.:.|....:|:.:.|::|..||||:.
Mouse   907 -------QEGSYSVLNRGVVSDWDALEVLWQHLF-YCKLKVQPEEMAVLVADSPISPRTNREKVA 963

  Fly   130 EVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDI 194
            |::||::...:.....||:|||||.|..:|:|:.||.|.:::.|:......|..|.|||:||.|:
Mouse   964 EILFERFHVPAMQTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPIDTYRLDVAGADL 1028

  Fly   195 TRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKV 259
            |.||.:|||..|::.....   .:|.:||..||:..|...|  :|...:.:...:.|||..||.:
Mouse  1029 TDYLTQLLLSGGHSLPKGG---IIRQIKEACCYVAMDTATE--MARNQSQVQVDFVLPDKHVITL 1088

  Fly   260 GGERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLER 324
            |.|||..|||||||:|:.:...|:.:||..:|...::..:.:|..::||.||||:..|.|.|:.:
Mouse  1089 GSERFCCPEALFQPNLLGLNQLGLPQLALLSINRLEVKQQEQLLANVVLEGGSTLINGFPERMRQ 1153

  Fly   325 EIKQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGF---WMSKQEYQEQ 386
            |:..                 ...:...|.|....::||:::|    .||.|   |::::||:|:
Mouse  1154 ELGP-----------------GATVLGSPHRAVAAWLGGSIMA----CRDSFQSLWLTRREYEEE 1197

  Fly   387 GLKVLQKLQ 395
            |...:.|.|
Mouse  1198 GPWAVYKYQ 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 124/395 (31%)
Actl11NP_080614.1 Actin 860..1205 CDD:278451 124/396 (31%)
NBD_sugar-kinase_HSP70_actin 860..1204 CDD:302596 124/395 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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