DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actr6

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_080190.1 Gene:Actr6 / 67019 MGIID:1914269 Length:396 Species:Mus musculus


Alignment Length:431 Identity:120/431 - (27%)
Similarity:193/431 - (44%) Gaps:88/431 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAG---SNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLR 70
            :|.|||....|.||:.   |..|...|.|...|......|:|.  |:||           .|.|.
Mouse     4 LVLDNGAYNAKIGYSHDSVSVIPNCQFRSKTARLKTFTANQID--EIKD-----------PSGLF 55

  Fly    71 SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEK 135
            .:|    |.:.|.:.|||....||||.||.:...:|..:|.|::|||..|.|..:|.|.|::||:
Mouse    56 YIL----PFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEE 116

  Fly   136 YGFDSAYIAIQAVLTLYAQGLISG-------------VVIDSGDGVTHICPVYEEFALPHLTRRL 187
            |.|       ||||.:.| |.:|.             :::|||...|||.|............|:
Mouse   117 YQF-------QAVLRVNA-GALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRI 173

  Fly   188 DIAGRDITRYLIKLLLLRGYAFNHSADFET--VRIMKEKLCYIGYDIEMEQRLAL----ETTVLV 246
            ::.|:.:|.:|.:::   .|...|..| ||  :..:||.:||:..|...:..:|.    :.||::
Mouse   174 NVGGKLLTNHLKEII---SYRQLHVMD-ETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMI 234

  Fly   247 ESYTLPDGRVIKVG------------------------GERFEAPEALFQPHLINVEGPGIAELA 287
            : |.|||...||.|                        .|||..||.||.|..|.::..||.|..
Mouse   235 D-YVLPDFSTIKKGFCKPREEMVLSGKYKFGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAI 298

  Fly   288 FNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDP 352
            ..:||....:::|..:|:|||:||::::||...|:..|::.|       ..|:    :.:.:..|
Mouse   299 VYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCL-------TPTD----YDVSVVLP 352

  Fly   353 PRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
            .......:.||.:::| ..|.:...:::::|:|.|..|.::
Mouse   353 ENPITYSWEGGKLISE-NDDFEDMVVTREDYEENGHSVCEE 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 120/429 (28%)
Actr6NP_080190.1 ACTIN 2..394 CDD:214592 120/431 (28%)
COG5277 2..393 CDD:227602 120/431 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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