DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp2 and POTEJ

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_011509985.1 Gene:POTEJ / 653781 HGNCID:37094 Length:1048 Species:Homo sapiens


Alignment Length:386 Identity:176/386 - (45%)
Similarity:247/386 - (63%) Gaps:20/386 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            |:|.|||:|..|.|:||.:.|..:|||:||.|  |....:|     .:|..:..||.||...|.:
Human   680 VLVIDNGSGMCKAGFAGDDAPRAVFPSIVGCP--RQQGMMG-----GMHQKESYVGKEAQSKRGI 737

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:.||||:|::.|||||..:|.:|| ..::.:.|....|||||.|:||..|||||.::|||.:.
Human   738 LTLKYPMEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFN 801

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.|:||||:|:||..|..:|:|:||||||||..|:|:..||||.|.|||:|||::|.||:|:|
Human   802 TPAMYVAIQAMLSLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGRELTDYLMKIL 866

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            ..|||.|...|:.|.||.:||||||:..|.|.|..:...::.|.:||.||||:||.:..|.|..|
Human   867 TERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMAMVASSSSLEKSYELPDGQVITISNEWFRCP 931

  Fly   268 EALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLE 332
            ||||||..:.:|..||.|..||:|..:|:|||.:||.:.|||||:|||||:..|:::||..|   
Human   932 EALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAAL--- 993

  Fly   333 RVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                    ..:..||||..||:||..|::||::||.::..:. .|:|||||.|.|..::.:
Human   994 --------APSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQ-MWISKQEYDESGPSIVHR 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 176/384 (46%)
POTEJXP_011509985.1 Ank_2 106..209 CDD:289560
ANK 130..265 CDD:238125
ANK repeat 137..166 CDD:293786
ANK repeat 168..209 CDD:293786
ANK 206..330 CDD:238125
ANK repeat 211..242 CDD:293786
Ank_2 216..308 CDD:289560
ANK repeat 244..275 CDD:293786
ANK repeat 277..308 CDD:293786
NBD_sugar-kinase_HSP70_actin 674..1048 CDD:302596 176/386 (46%)
ACTIN 678..1048 CDD:214592 176/386 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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