DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and POTEI

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001358855.1 Gene:POTEI / 653269 HGNCID:37093 Length:1097 Species:Homo sapiens


Alignment Length:386 Identity:179/386 - (46%)
Similarity:250/386 - (64%) Gaps:20/386 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            |:|.|||:|..|.|:||.:.|..:|||:||||  |....:|     .:|..:..||.||...|.:
Human   729 VLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RQQGMMG-----GMHQKESYVGKEAQSKRGI 786

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:.||||:|::.|||||..:|.:|| ..::.:.|....|||||.|:||..|||||.::|||.:.
Human   787 LTLKYPMEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFN 850

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.|:||||:|:||..|..:|:|:||||||||..|:|:..||||.|.|||:|||::|.||:|:|
Human   851 TPAMYVAIQAMLSLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGRELTDYLMKIL 915

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            ..|||.|...|:.|.||.:||||||:..|.|.|..:|..::.|.:||.||||:||.:|.|.|..|
Human   916 TERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMAMAASSSSLEKSYELPDGQVITIGNEWFRCP 980

  Fly   268 EALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLE 332
            ||||||..:.:|..||.|..||:|..:|:|||.:||.:.|||||:|||||:..|:::||..|   
Human   981 EALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAAL--- 1042

  Fly   333 RVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                    ..:..||||..||:||..|::||::||.::..:. .|:|||||.|.|..::.:
Human  1043 --------APSMLKIRIIAPPKRKYSVWVGGSILASLSTFQQ-MWISKQEYDESGPSIVHR 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 179/384 (47%)
POTEINP_001358855.1 Ank_2 158..>361 CDD:393464
ANK repeat 174..203 CDD:293786
ANK repeat 205..236 CDD:293786
ANK repeat 238..269 CDD:293786
ANK repeat 271..302 CDD:293786
ANK repeat 304..335 CDD:293786
CCDC144C 670..>723 CDD:373382
NBD_sugar-kinase_HSP70_actin 723..1097 CDD:388382 179/386 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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