DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actr10

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_062759.2 Gene:Actr10 / 56444 MGIID:1891654 Length:417 Species:Mus musculus


Alignment Length:417 Identity:94/417 - (22%)
Similarity:180/417 - (43%) Gaps:82/417 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRP-MIRAVNKIG-DIEVKDLHVDDLMVGDEASQ 68
            :..:|.|.|..|.|||:||...|..|.||::.|. |.:.:..:. :|..::|:          |.
Mouse    13 KTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKRAGMSKPIKVVQYNINTEELY----------SY 67

  Fly    69 LRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMF 133
            |:..:.:.|                    |  :.:.::|.:.::::.|..:.|:..||.:..|:|
Mouse    68 LKEFIHILY--------------------F--RHLLVNPRDRRVVVIESVLCPSHFRETLTRVLF 110

  Fly   134 EKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYL 198
            :.:...|..:|...::.|...|:.|.:|:|.|...:.:.|:||...:.:....|.:.|:.:.:.|
Mouse   111 KYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKEL 175

  Fly   199 IKLLLLR-----GYAFNHSAD----------FETVRIMKEKLCYIGYDIEMEQRLALE------- 241
            ...||.:     |.|...|..          .|.:::   :.|::.   ::::.|.::       
Mouse   176 ETQLLEQCTVDTGAAKGQSLPSVMGSVPEGVLEDIKV---RTCFVS---DLKRGLQIQAAKFNID 234

  Fly   242 ------TTVLVESYTLPDGRVIKV-GGERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIR 299
                  |......|.|...:::.| |..|....|.||:.   :.|...:|.|..:::....||.|
Mouse   235 GNNERPTPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQ---DNEEKSVATLILDSLLQCPIDTR 296

  Fly   300 PELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMV-FIGG 363
            .:|.:::|:.||::|.||...||..||:.|..:...|   :.|.....||..||.:.:.| ::||
Mouse   297 KQLAENLVIIGGTSMLPGFLHRLLAEIRYLVEKPKYK---KTLGTKNFRIHTPPAKANCVAWLGG 358

  Fly   364 AV---LAEVTKDRDGFWMSKQEYQEQG 387
            ||   |.::...|.   :||:.|.:.|
Mouse   359 AVFGALQDILGSRS---ISKEYYNQTG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 94/417 (23%)
Actr10NP_062759.2 Actin 13..364 CDD:330363 88/394 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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