DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and actr6

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001016472.1 Gene:actr6 / 549226 XenbaseID:XB-GENE-5860964 Length:396 Species:Xenopus tropicalis


Alignment Length:423 Identity:114/423 - (26%)
Similarity:186/423 - (43%) Gaps:84/423 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAG---SNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLR 70
            :|.|||....|.||:.   |..|...|.:...|......|:|.  |:||           .|.|.
 Frog     4 LVLDNGAYNAKIGYSHGQVSVIPNCQFRTKTARLKTFTANQID--EIKD-----------PSGLF 55

  Fly    71 SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEK 135
            .:|    |.:.|.:.|||....||||.||.:...:|..::.|::|||..|.:..:|.|.|::||:
 Frog    56 YIL----PYQKGYLVNWDVQRQVWDYLFGKEMFQVDFPDSNIIITEPYFNFSSIQESMNEILFEE 116

  Fly   136 YGFDSAYIAIQAVLTLYAQGLISG-------------VVIDSGDGVTHICPVYEEFALPHLTRRL 187
            |.|       ||.|.:.| |.:|.             :::|||...|||.|............|:
 Frog   117 YQF-------QAALRINA-GALSAHRYFRDNPSELCCIIVDSGYSFTHIVPFCRSKKKKEGIIRI 173

  Fly   188 DIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLAL----ETTVLVES 248
            ::.|:.:|.:|.:::..|  ......:...:..:||.:||:..|...:...|.    |.:|:|: 
 Frog   174 NVGGKLMTNHLKEIISYR--QLQVMDETHVINQVKEDVCYVSTDFYKDMETAKLKGEENSVMVD- 235

  Fly   249 YTLPDGRVIKVG------------------------GERFEAPEALFQPHLINVEGPGIAELAFN 289
            |.|||...||.|                        .|||..||.||.|..|.::..||.|...:
 Frog   236 YVLPDFSTIKKGFCKPREEMVFSGKTTAGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVH 300

  Fly   290 TIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDPPR 354
            :|.....:::|..||:|||:||:|::||...|:..|:::|       ..|:    |.:.:..|..
 Frog   301 SINNLPEEMQPHFYKNIVLTGGNTLFPGFRERVFSEVRKL-------TPTD----FDVSVILPEN 354

  Fly   355 RKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQG 387
            .....:.||.:::| ..|.:...:::::|:|.|
 Frog   355 PISYAWEGGKIISE-NDDFEDMVVTREDYEENG 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 114/423 (27%)
actr6NP_001016472.1 ACTIN 2..394 CDD:214592 114/423 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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