DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp2 and POTEE

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001077007.1 Gene:POTEE / 445582 HGNCID:33895 Length:1075 Species:Homo sapiens


Alignment Length:386 Identity:180/386 - (46%)
Similarity:248/386 - (64%) Gaps:20/386 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            |:|.|||:|..|.|:||.:.|..:|||:||||  |....:|     .:|..:..||.||...|.:
Human   707 VLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RQQGMMG-----GMHQKESYVGKEAQSKRGI 764

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:.||||:|::.|||||..:|.:|| ..::.:.|....|||||.|:||..|||||.::|||.:.
Human   765 LTLKYPMEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFN 828

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.|:|||||.:||..|..:|:|:||||||||..|:||..||||.|.|||:|||::..||:|:|
Human   829 TPAMYVAIQAVPSLYTSGRTTGIVMDSGDGVTHTVPIYEGNALPHATLRLDLAGRELPDYLMKIL 893

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            ..|||.|...|:.|.||.:||||||:..|.|.|...|..::.|.:||.||||:||.:|.|||..|
Human   894 TERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 958

  Fly   268 EALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLE 332
            ||||||..:.:|..||.|..||:|..:|:|||.:||.:.|||||:|||||:..|:::||..|   
Human   959 EALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAAL--- 1020

  Fly   333 RVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                    ..:..||||..||:||..|::||::||.::..:. .|:|||||.|.|..::.:
Human  1021 --------APSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQ-MWISKQEYDESGPSIVHR 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 180/384 (47%)
POTEENP_001077007.1 Ank_4 143..193 CDD:290365
ANK 167..292 CDD:238125
ANK 1 172..201
ANK repeat 174..203 CDD:293786
Ank_2 177..269 CDD:289560
ANK repeat 205..236 CDD:293786
ANK 2 205..234
ANK 233..357 CDD:238125
ANK repeat 238..269 CDD:293786
ANK 3 238..267
Ank_2 243..335 CDD:289560
ANK repeat 271..302 CDD:293786
ANK 4 271..300
ANK repeat 304..335 CDD:293786
ANK 5 304..333
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 369..530
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..599
NBD_sugar-kinase_HSP70_actin 701..1075 CDD:302596 180/386 (47%)
Actin-like 702..1075 180/386 (47%)
ACTIN 705..1075 CDD:214592 180/386 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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