DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Arp1

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:389 Identity:161/389 - (41%)
Similarity:244/389 - (62%) Gaps:31/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPM-IRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            :|.|||:|.:|.|:||.:.|...||:.:|||. :|.:  .|.:|      .|:.||.:|.:.|.|
  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVM--AGALE------GDIFVGPKAEEHRGL 68

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:.||||:|:|.:|:||..:|.|.:..:::.....:..:||||.|:||.:||||..|..||...
  Fly    69 LSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGIN 133

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.::::||||:|||.|.::|||:||||||||..|:||.||:||...|:||||||:||||..|:
  Fly   134 APALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLI 198

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            ...|:.|..:|:||.||.:|||:||:..:.:.|:.:..|..    :|.||||::.::|..||.||
  Fly   199 RREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF----AYKLPDGKIFEIGPARFRAP 259

  Fly   268 EALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLE 332
            |.||:|.|:..|..||.::...:|:.:|:|:|..||::||||||||::.|...||..|:|     
  Fly   260 EVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK----- 319

  Fly   333 RVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGF---WMSKQEYQEQGLKVLQK 393
               |:..:.|   ||||..|..|....::||::||.:    |.|   |:||:||:|:|.|.:.:
  Fly   320 ---KHSAKDL---KIRIAAPQERLYSTWMGGSILASL----DTFKKMWISKREYEEEGQKAVHR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 161/387 (42%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 161/389 (41%)

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