DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and actr10

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_956464.1 Gene:actr10 / 393139 ZFINID:ZDB-GENE-040426-768 Length:415 Species:Danio rerio


Alignment Length:411 Identity:93/411 - (22%)
Similarity:171/411 - (41%) Gaps:72/411 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLR 70
            :..:|.|.|..:.|||:||...|..|.||.:..|        |..||    |..:.......:|.
Zfish    13 KTAVVIDLGAAYTKCGFAGETGPRFIIPSEIKHP--------GSQEV----VAVVQFNINTEELY 65

  Fly    71 SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEK 135
            ::|:              :..|:..:    :.:.::|.:.::::.|..:.|:..|:.:..|:|..
Zfish    66 TILK--------------EFIHLLYF----RHLLVNPRDRRVVVIESILCPSHYRDTLSRVLFRH 112

  Fly   136 YGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIK 200
            :...|...|...::::...||.|.:|:|.|...|.:.|:||...:......|.:.|:.|.:.|..
Zfish   113 FEVPSVLFAPSHLMSIMTLGLQSALVMDCGYTETLVLPIYEGIPILSAWEALPMGGKAIHKELQS 177

  Fly   201 LL-------------LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVE----- 247
            ||             |......:|..: :.|..:|.:.|::.   ::::.|.::......     
Zfish   178 LLSEQCTVDTDSSTGLQLPSVISHIPE-DVVEDIKVRTCFVS---DLQRGLKIQEAKFNTDAERP 238

  Fly   248 ------SYTLPDGRVIKVGG-ERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKH 305
                  .|.|...:::.|.| .|....|.||:.   :.|...||.|..:|:....||.|..|.::
Zfish   239 APPPDVDYPLDGQKILHVKGFIRDSVAEMLFEQ---DNEEKSIATLLLDTLVKCPIDTRKVLSEN 300

  Fly   306 IVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDPPRRKD-MVFIGGAV---L 366
            :::.||:.|.||...||..||:.| :|:....|.  ||....||..||.:.: ..::|||:   |
Zfish   301 LLIIGGTAMLPGFLHRLLAEIRSL-VEKPKYRDA--LATKSFRIHSPPAKPNCTAWLGGAIFGAL 362

  Fly   367 AEVTKDRDGFWMSKQEYQEQG 387
            .::...|.   :|:..|...|
Zfish   363 QDILGSRS---VSRDYYNHTG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 93/411 (23%)
actr10NP_956464.1 NBD_sugar-kinase_HSP70_actin 12..362 CDD:302596 88/388 (23%)
ACTIN 13..362 CDD:214592 88/388 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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