DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and actr8

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001001400.1 Gene:actr8 / 326866 ZFINID:ZDB-GENE-030131-5065 Length:623 Species:Danio rerio


Alignment Length:481 Identity:88/481 - (18%)
Similarity:168/481 - (34%) Gaps:167/481 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HVDDLMVGDEASQLR--SLLEVSYPMENGVVRNWD-----------DMCHVWDYTFGPKKMDI-- 105
            |..:.:||:||..:.  ....|.:|:..|.:....           |:.|:|.:.. .|.:.|  
Zfish   161 HHPEYVVGEEALYVNPTDCYSVHWPVCRGRLNLHSGSGGSLSAVMMDLEHIWTHAL-QKLLQIPL 224

  Fly   106 -DPTNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVT 169
             |....:.:|..|.:...::.::::.::..|.||.:..:..::|...:..||.|..|:|.||..|
Zfish   225 KDLKYYRCILLIPDIYNRQHVKEIVNMLLVKMGFSAVVVHQESVCATFGSGLSSACVVDVGDQKT 289

  Fly   170 HICPVYEEFALPHLTRRLDIA--GRDITRYLIKLLLLRGYAF-----NHSADFETVRIMKEKLCY 227
            .:|.|  |..:.|.:.||.:|  |.|:||....|:...|:.:     .:..|...::.:||..|:
Zfish   290 SVCCV--EDGVSHRSSRLCLAYGGSDVTRCFFWLMQRAGFPYRDCQLGNKLDCVLLQQLKESFCH 352

  Fly   228 IGYDIEMEQRLALETTVLVESYTLPDGRV----IKVGGERFEAPEALFQPHLINVEG-------- 280
            :..||...|.....|       ..||..|    :::|.|:.:||..||.|....:.|        
Zfish   353 LDQDISGLQDHEFRT-------RFPDSPVLLYQLRLGDEKLQAPMTLFYPAAFGIVGQRMTSLLH 410

  Fly   281 --------------------------------------------PGIAELAFNTIQAADIDI--- 298
                                                        ..:.|::..:....|:|:   
Zfish   411 RSQGDAEDPHDEHFLLTTQSKQDQSSKASADRKSFPKPSSFEGESSVCEVSDRSSLGQDLDLGHS 475

  Fly   299 ---------------------------------------------------RPELYKHIVLSGGS 312
                                                               :.::|..|::.||.
Zfish   476 QAECLVGGAETEETPSALLSRKTAMSQFEGKALGIDKAILHSIDSCASDETKRKMYSCILVVGGG 540

  Fly   313 TMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDP---PRRKD-----MVFIGGAVLA-- 367
            .::.|....|:        .|:|   .:....|:..:|..   .|.||     .|:.||:|||  
Zfish   541 LLFHGAQEFLQ--------HRIL---NKMPPSFRCMVESVDVITRPKDTDARVCVWKGGSVLACL 594

  Fly   368 EVTKDRDGFWMSKQEYQEQGLKVLQK 393
            :.|::   .|:.::|:|..|:::|::
Zfish   595 DTTQE---LWIHQREWQRFGVRMLRE 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 88/479 (18%)
actr8NP_001001400.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
NBD_sugar-kinase_HSP70_actin 207..617 CDD:302596 80/433 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..458 0/29 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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