DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actl9

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001101547.1 Gene:Actl9 / 314659 RGDID:1306886 Length:415 Species:Rattus norvegicus


Alignment Length:387 Identity:119/387 - (30%)
Similarity:210/387 - (54%) Gaps:27/387 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVG-RPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSL 72
            :|.|.|||..|.|:||.:.||:...:::| :|..:|.....::|.        .:| ||::.|..
  Rat    51 VVIDMGTGTCKVGFAGQSQPTYSVATILGCQPKKQATKGQSELET--------FIG-EAARSRPE 106

  Fly    73 LEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYG 137
            |.:..|:.||:|.:|:....:|.:.. ...:.:......:|.::||.:|..||||::||.||...
  Rat   107 LRLVKPIRNGIVVDWEAAELIWRHIL-EHDLRVATQEHPLLFSDPPFSPATNREKLVEVAFESLH 170

  Fly   138 FDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLL 202
            ..:.|:|.|:||::||.|.::|:|:|:|.||::..||.:.:.|||..:|||:||..:|.:|.:::
  Rat   171 SPALYVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQGYNLPHAIQRLDLAGNHLTAFLAEMI 235

  Fly   203 LLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAP 267
            |..|::.... |.:.|..:|...||:..|.:.||  |.......::..|||||.:.:|.|.|:.|
  Rat   236 LGSGFSLQQE-DLDLVENIKHHYCYLASDFQKEQ--ARPDQECKQTLRLPDGRTVTLGKELFQCP 297

  Fly   268 EALFQPHLINVEGP-GIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYL 331
            |.||.|..|....| |:..:|..::.....|:||.:.::::|.|||:::.||.||...|:    |
  Rat   298 ELLFHPPEIPGLSPMGLPAMAEQSLLRVPQDLRPHVAQNVILCGGSSLFTGLESRFRAEL----L 358

  Fly   332 ERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
            ..:...|       .:.:...|.|...|:|||::||.:...: ..|:.:::|:|.|.:|:.:
  Rat   359 RSLSPED-------HVVVMAQPNRNLSVWIGGSILASLHAFQ-SCWVLREQYEEMGPQVVYR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 119/385 (31%)
Actl9NP_001101547.1 NBD_sugar-kinase_HSP70_actin 46..415 CDD:302596 119/387 (31%)
Actin 48..414 CDD:278451 119/387 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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