DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actr10

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001009602.1 Gene:Actr10 / 299121 RGDID:1306515 Length:417 Species:Rattus norvegicus


Alignment Length:414 Identity:91/414 - (21%)
Similarity:180/414 - (43%) Gaps:76/414 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRP-MIRAVNKIG-DIEVKDLHVDDLMVGDEASQ 68
            :..:|.|.|..|.|||:||...|..|.||::.|. |.:.:..:. :|..::|:          |.
  Rat    13 KTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKRAGMSKPIKVVQYNINTEELY----------SY 67

  Fly    69 LRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMF 133
            |:..:.:.|                    |  :.:.::|.:.::::.|..:.|:..||.:..|:|
  Rat    68 LKEFIHILY--------------------F--RHLLVNPRDRRVVVIESVLCPSHFRETLTRVLF 110

  Fly   134 EKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYL 198
            :.:...|..:|...::.|...|:.|.:|:|.|...:.:.|:||...:.:....|.:.|:.:.:.|
  Rat   111 KYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKEL 175

  Fly   199 IKLLL---------LRGYAFNH---SADFETVRIMKEKLCYIGYDIEMEQRLALETTVL-VE--- 247
            ...||         .:|.:...   |.....:..:|.:.|::.   ::::.|.::.... ::   
  Rat   176 ETQLLEQCTVDTGAAKGQSLPSVMGSVPESVLEDIKVRTCFVS---DLQRGLQIQAAKFNIDGNN 237

  Fly   248 ---------SYTLPDGRVIKV-GGERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPEL 302
                     .|.|...:::.| |..|....|.||:.   :.|...:|.|..:::....:|.|.:|
  Rat   238 ERPSPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQ---DNEEKSVATLILDSLLQCPVDTRKQL 299

  Fly   303 YKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMV-FIGGAV- 365
            .:::|:.||::|.||...||..||:.|..:...|   :.|.....||..||.:.:.| ::|||| 
  Rat   300 AENLVIIGGTSMLPGFLHRLLAEIRYLVEKPKYK---KTLGTKNFRIHTPPAKANCVAWLGGAVF 361

  Fly   366 --LAEVTKDRDGFWMSKQEYQEQG 387
              |.::...|.   :||:.|.:.|
  Rat   362 GALQDILGSRS---ISKEYYNQTG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 91/414 (22%)
Actr10NP_001009602.1 NBD_sugar-kinase_HSP70_actin 13..364 CDD:418402 85/391 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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