DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actbl2

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001099879.1 Gene:Actbl2 / 294732 RGDID:1309504 Length:376 Species:Rattus norvegicus


Alignment Length:385 Identity:184/385 - (47%)
Similarity:247/385 - (64%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            :|.|||:|..|.|:.|.:.|..:||||||||..:.| .:|      :...|..|||||...|.:|
  Rat     9 LVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGV-MVG------MGQKDCYVGDEAQSKRGIL 66

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|:|||.|||||..:|.:|| ..::.:.|....|||||.|:||..|||||.::|||.:..
  Rat    67 TLKYPIEHGVVTNWDDMEKIWYHTF-YNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNT 130

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .:.|:||||||:|||.|..:|.|:||||||||..|:||.:||||...|||:||||:|.||:|:|.
  Rat   131 PAMYVAIQAVLSLYASGRTTGNVMDSGDGVTHTVPIYEGYALPHGILRLDLAGRDLTDYLMKILT 195

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPE 268
            .|||.|..:|:.|.||.:||||||:..|.|.|...|..::.|..||.||||:||.:|.|||..||
  Rat   196 ERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQVITIGNERFRCPE 260

  Fly   269 ALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER 333
            |:|||..:.:|..||.|..||:|...|:|||.:||.:.|||||||||||:..|:::||..|    
  Rat   261 AIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIVTL---- 321

  Fly   334 VLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                   ..:..||:|..||.||..|:|||::||.::..:. .|:|||||.|.|..::.:
  Rat   322 -------APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDEAGPPIVHR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 184/383 (48%)
Actbl2NP_001099879.1 ASKHA_NBD_actin 8..371 CDD:466823 184/381 (48%)

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