DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actbl2

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_780706.1 Gene:Actbl2 / 238880 MGIID:2444552 Length:376 Species:Mus musculus


Alignment Length:385 Identity:183/385 - (47%)
Similarity:248/385 - (64%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            :|.|||:|..|.|:.|.:.|..:||||||||..:.| .:|      :...|..|||||...|.:|
Mouse     9 LVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGV-MVG------MGQKDCYVGDEAQSKRGIL 66

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|:|||.|||||..:|.:|| ..::.:.|....|||||.|:||..|||||.::|||.:..
Mouse    67 TLKYPIEHGVVTNWDDMEKIWYHTF-YNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNT 130

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .:.|:||||||:|||.|..:|:|:||||||||..|:||.:||||...|||:||||:|.||:|:|.
Mouse   131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPE 268
            .|||.|..:|:.|.||.:||||||:..|.|.|...|..::.|..||.||||:||.:|.|||..||
Mouse   196 ERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQVITIGNERFRCPE 260

  Fly   269 ALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER 333
            |:|||..:.:|..||.|..||:|...|:|||.:|:.:.|||||||||||:..|:::||..|    
Mouse   261 AIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMYPGIADRMQKEIVTL---- 321

  Fly   334 VLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                   ..:..||:|..||.||..|:|||::||.::..:. .|:|||||.|.|..::.:
Mouse   322 -------APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDEAGPPIVHR 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 183/383 (48%)
Actbl2NP_780706.1 NBD_sugar-kinase_HSP70_actin 1..376 CDD:302596 183/385 (48%)
ACTIN 7..376 CDD:214592 183/385 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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