DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and arx-2

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_505657.1 Gene:arx-2 / 179440 WormBaseID:WBGene00000200 Length:395 Species:Caenorhabditis elegans


Alignment Length:396 Identity:289/396 - (72%)
Similarity:342/396 - (86%) Gaps:7/396 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSKGRNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDE 65
            |||:||.|||.|||||||||||||:|||.||||||||||::|:..::|:||:|     |||||:|
 Worm     1 MDSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIK-----DLMVGEE 60

  Fly    66 ASQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIE 130
            .||||.:|:::|||:||:|||||||.||||:||||:|:||||...|:||||||:||..|||||.:
 Worm    61 CSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQ 125

  Fly   131 VMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDIT 195
            ||||:|||:|.|:|:|||||||||||::|||:||||||||||||||.|||.||||||||||||||
 Worm   126 VMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDIT 190

  Fly   196 RYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVG 260
            :|||||||.|||.|||||||||||.||||||||.||:|.|:|||||||||.:.|||||||||::|
 Worm   191 KYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLG 255

  Fly   261 GERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLERE 325
            ||||||||.||||||||||..|::||.|..|||:|||.|.:.|||||||||:|||||||||||:|
 Worm   256 GERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKE 320

  Fly   326 IKQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRD-GFWMSKQEYQEQGL- 388
            :|||||:|||..:|:...|||||||.||.||.|||:||||||.:.|||| .||:||:||:|.|: 
 Worm   321 LKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGGIA 385

  Fly   389 KVLQKL 394
            :.:.||
 Worm   386 RCMAKL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 283/388 (73%)
arx-2NP_505657.1 NBD_sugar-kinase_HSP70_actin 1..383 CDD:302596 286/386 (74%)
ACTIN 6..392 CDD:214592 285/391 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156066
Domainoid 1 1.000 595 1.000 Domainoid score I99
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4181
Inparanoid 1 1.050 604 1.000 Inparanoid score I504
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54319
OrthoDB 1 1.010 - - D280976at33208
OrthoFinder 1 1.000 - - FOG0003456
OrthoInspector 1 1.000 - - oto18617
orthoMCL 1 0.900 - - OOG6_102757
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R82
SonicParanoid 1 1.000 - - X2348
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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