DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and ACTRT1

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:390 Identity:135/390 - (34%)
Similarity:215/390 - (55%) Gaps:33/390 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGR-----PMIRAVNKIGDIEVKDLHVDDLMVGDEASQ 68
            ::.|||:|..|.|.:|...|.|:..|::|.     |:.|...|             ..||.||..
Human    12 VIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQK-------------YFVGQEALY 63

  Fly    69 LRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMF 133
            ....|.:.||:|.|:|..||||..:|.:.| .:::.:.|:...:|:|||.:||.:.|||:.|:||
Human    64 KYEALHLHYPIERGLVTGWDDMEKLWKHLF-ERELGVKPSQQPVLMTEPSLNPREIREKLAEMMF 127

  Fly   134 EKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYL 198
            |.:.....|::..||..|||...::|:|:|||||||...|::|.::|||...:|.:||||||.:|
Human   128 ETFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHL 192

  Fly   199 IKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGER 263
            .:||...|:.|....:...|..:|||||||.  :|.|:.|......::.:|.||||.||..|.|.
Human   193 TRLLFASGFNFPCILNKAVVNNIKEKLCYIA--LEPEKELRKSRGEVLGAYRLPDGHVIHFGDEL 255

  Fly   264 FEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQ 328
            ::.||.||.|..:.:..||::::..::|...|.||:.:||..||||||:|:.|||..||.:|::|
Human   256 YQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQ 320

  Fly   329 LYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
            |..:..           .|:|...|.|....:||.:::..::..:. .|::..:::|.|..|:|:
Human   321 LASKGT-----------PIKITASPDRCFSAWIGASIMTSMSSFKQ-MWVTSADFKEYGTSVVQR 373

  Fly   394  393
            Human   374  373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 134/388 (35%)
ACTRT1NP_612146.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 132/382 (35%)

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