DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Actc1

DIOPT Version :10

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_033738.1 Gene:Actc1 / 11464 MGIID:87905 Length:377 Species:Mus musculus


Alignment Length:182 Identity:37/182 - (20%)
Similarity:66/182 - (36%) Gaps:65/182 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FSPIQGNP---NYIQ-YEYKFNWVSI-FSIFVLSYTISSFYIFLKLSFFSIKDREKIRNGGLRIE 68
            |.|:.||.   .::| ||   |.:|. ||.:.:|:...:........|...||..|         
Mouse   218 FIPVFGNKLLRKWLQAYE---NSLSFHFSNYFVSFLGETTTTLAGAGFTEEKDNLK--------- 270

  Fly    69 IFQSFFAMQFWNIQLIIGEYMTFRIPYTGLVTSFYASENPQFMLKLFMLIYNWAFYSSQLLTVLF 133
                      |::.:....|:.|                |:.|::   ::.:|....|:.|..  
Mouse   271 ----------WDMTIAKPLYVEF----------------PRSMVE---VVTSWNLPMSRWLNT-- 304

  Fly   134 YVLRAAVLYSRNQKSMEKIIL-----SVIYFIIF--------IGFVAALPHV 172
            ||.|.|:.|.    |...||:     ::::.:.|        :||:..:.||
Mouse   305 YVFRKALRYG----SFTAIIMTYTASALLHGLSFHIGAVLLTLGFITYIEHV 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 37/182 (20%)
Actc1NP_033738.1 ASKHA_NBD_actin 8..372 CDD:466823 37/182 (20%)

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