DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and LOC102723502

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001382398.1 Gene:LOC102723502 / 102723502 -ID:- Length:581 Species:Homo sapiens


Alignment Length:224 Identity:48/224 - (21%)
Similarity:81/224 - (36%) Gaps:59/224 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 DIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQ-GLISGVVIDSGDG 167
            ||:..| |..||...:...:.::::::.:.:|....:|       |..|.: .||..|...|...
Human   264 DIESKN-KCGLTPLLLGVHEQKQEVVKFLIKKKANLNA-------LDRYGRTALILAVCCGSASI 320

  Fly   168 VTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAF--NHSADFETVRIMKEK--LCYI 228
            |..:           |.:.:|::.:|::..     ..|.||.  :|....|.:...|||  |...
Human   321 VNLL-----------LEQNVDVSSQDLSGQ-----TAREYAVSSHHHVICELLSDYKEKQMLKIS 369

  Fly   229 GYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGPGIAELAFNTIQA 293
            ..:...||.|.|.:.        .:.:.:||...  ..||.:.|...||.:              
Human   370 SENSNPEQDLKLTSE--------EESQRLKVSEN--SQPEKMSQEPEINKD-------------- 410

  Fly   294 ADIDIRPELYKHIVLSGGSTMYPGLPSRL 322
            .|.::..|:.||     ||... |||..|
Human   411 CDREVEEEIKKH-----GSNPV-GLPENL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 48/224 (21%)
LOC102723502NP_001382398.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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