DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and Acte1

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001356763.1 Gene:Acte1 / 102636989 MGIID:2685344 Length:382 Species:Mus musculus


Alignment Length:390 Identity:129/390 - (33%)
Similarity:209/390 - (53%) Gaps:25/390 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEV-----KDLHVDDLMVGDEASQ 68
            :|||.|:||.|.|::|:..|..:||:::|:  ::.....|...|     :.|...|..:|.|...
Mouse     6 LVCDYGSGFSKVGFSGTQAPQAVFPTILGK--MKHTGLSGPACVFQNVLEGLGEQDWFIGAETQT 68

  Fly    69 LRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMF 133
            .|:.|.:.||:..|.:.|||::..:|.|:| ...:.|.|....||:||.|:...:.:.:|.:::|
Mouse    69 NRTELNMYYPISRGAITNWDNVEKIWHYSF-YHSLQIAPEQHPILITEAPLTSKEAKSRMTQILF 132

  Fly   134 EKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYL 198
            |.:.|.:.|.|.||||:|.|.|..||..|:||||:|:..||...:.|...|.:|||||:|:|.||
Mouse   133 ETFNFPALYTANQAVLSLIASGRTSGTAIESGDGMTYFVPVMNGYPLHLSTTKLDIAGQDLTLYL 197

  Fly   199 IKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTV--LVESYTLPDGRVIKVGG 261
            :|||...|......||.|.:|.:|:|..|:..|..||..   :|:.  ..:.:|||||:.|.:|.
Mouse   198 MKLLSDNGNVLETIADLEYIRDLKDKYSYVALDYNMEMS---KTSAPSFQKKFTLPDGKEINLGQ 259

  Fly   262 ERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREI 326
            |.|...|.||...|:....|||..|...:|.:.:...:..|:.:|||:||::...||..|:::| 
Mouse   260 EAFMCSEVLFDTSLLERANPGIHMLTLESIMSCEKSHQRTLFNYIVLTGGTSACTGLRFRMQKE- 323

  Fly   327 KQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVL 391
                :.:|:..|      |.:::...|..|...:||.::|:.:...:| .|::..||.|.|..|:
Mouse   324 ----MAKVVSPD------FCVKVTASPYAKYSAWIGASILSSLPLFKD-MWITNHEYLEIGPSVI 377

  Fly   392  391
            Mouse   378  377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 129/390 (33%)
Acte1NP_001356763.1 NBD_sugar-kinase_HSP70_actin 2..382 CDD:354300 129/390 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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