DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp2 and LOC100361457

DIOPT Version :9

Sequence 1:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_002729242.3 Gene:LOC100361457 / 100361457 RGDID:2320108 Length:375 Species:Rattus norvegicus


Alignment Length:385 Identity:182/385 - (47%)
Similarity:251/385 - (65%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRSLL 73
            :|.|||:|..|.|:||.:.|..:|||:||||..:.| .:|      :...|..|||||...|.:|
  Rat     8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV-MVG------MGQKDSYVGDEAQSKRGIL 65

  Fly    74 EVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGF 138
            .:.||:|:|:|.|||||..:|.:|| ..::.:.|....:||||.|:||..|||||.::|||.:..
  Rat    66 TLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 129

  Fly   139 DSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 203
            .:.|:||||||:|||.|..:|:|:||||||||..|:||.:||||...|||:||||:|.||:|:|.
  Rat   130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 194

  Fly   204 LRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPE 268
            .|||:|..:|:.|.||.:||||||:..|.|.|...|..::.|.:||.||||:||.:|.|||..||
  Rat   195 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259

  Fly   269 ALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER 333
            |||||..:.:|..||.|..||:|...|:|||.:||.:.|||||:|||||:..|:::||..|    
  Rat   260 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL---- 320

  Fly   334 VLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393
                   ..:..||:|..||.||..|:|||::||.::..:. .|:|||||.|.|..::.:
  Rat   321 -------APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPSIVHR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 182/383 (48%)
LOC100361457XP_002729242.3 PTZ00281 1..375 CDD:173506 182/385 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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