Protein Alignment Arp2 and actr3b

DIOPT Version :9

• Sequence 1: NP_001259621.1
• Gene: Arp2 / 32623
• FlyBaseID: FBgn0011742
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: XP_005162538.1
• Gene: actr3b / 100038776
• ZFINID: ZDB-GENE-070424-10
• Length: 419
• Species: Danio rerio
• Alignment Length: 419
• Identity: 139/419 - (33%)
• Similarity: 209/419 - (49%)
• Gaps: 58/419 - (13%)

  Fly    10 VCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDL--HVDDL--MVGDEASQLR 70
            |.|.|||:.|.||||:..|..|.|:.:.   :|....:||...:.|  .||||  .:||||.. :
Zfish    10 VIDCGTGYTKIGYAGNTEPQFIMPTCIA---VRESASVGDQAQRRLVKGVDDLDFFIGDEAID-K 70

  Fly    71 SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEK 135
            ......:|:.:|::.:||.|....:.... |.:..:|.:...|:||||:|..:|||.:.|:|||.
Zfish    71 PNYATKWPIRHGIIEDWDFMEKFMEQVIF-KYLRAEPEDHNFLMTEPPLNTPENREYLAEIMFET 134

  Fly   136 YGFDSAYIAIQAVLTLYA--------QGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGR 192
            :.....|||:||||.|.|        :..::|:||||||||||..||.|.:.:....:.:.||||
Zfish   135 FNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPVAEGYVIGSCIKHIPIAGR 199

  Fly   193 DITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVI 257
            |||.::.:||..|..........||.:.:||:.|||..||..|          ...|.:..|:.|
Zfish   200 DITYFIQQLLREREIGIPPEQSLETAKAVKERYCYICPDIVKE----------FTKYDMDPGKWI 254

  Fly   258 K----------------VGGERFEAPEALFQPHLINVE--GPGIAELAFNTIQAADIDIRPELYK 304
            |                ||.|||..||..|.|...|.:  .| |:::....||...||:|..|||
Zfish   255 KKYKGINAISKNEFQIDVGYERFLGPEIFFHPEFANPDFMQP-ISDVVDEVIQNCPIDVRRPLYK 318

  Fly   305 HIVLSGGSTMYPGLPSRLEREIK-----QLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGA 364
            :|||||||||:.....||:|::|     :|.|...|.....|....::::.....::..|:.||:
Zfish   319 NIVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPMEVQVISHHMQRYAVWFGGS 383

  Fly   365 VLAEVTKDRDGFWM---SKQEYQEQGLKV 390
            :||...:    |:.   :|::|:|.|.::
Zfish   384 MLASTPE----FFQVCHTKKDYEEYGPRI 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp2	NP_001259621.1	ACTIN	6..393	CDD:214592	139/419 (33%)
actr3b	XP_005162538.1	COG5277	1..411	CDD:227602	139/419 (33%)
		PTZ00280	3..416	CDD:240343	139/419 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5277
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910