DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32669 and cho-1

DIOPT Version :9

Sequence 1:NP_727460.1 Gene:CG32669 / 326229 FlyBaseID:FBgn0052669 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_502539.1 Gene:cho-1 / 178274 WormBaseID:WBGene00000501 Length:576 Species:Caenorhabditis elegans


Alignment Length:550 Identity:119/550 - (21%)
Similarity:209/550 - (38%) Gaps:100/550 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILAVVL--IISVAIGIYYRFVGGKQS------------TTTEYLLADRSMNVAPVAFSLMASFMS 61
            |:|:|.  ::.:.:||:    .|::|            .|.|.:||.|::......|::.|:::.
 Worm     7 IVAIVFFYVLILVVGIW----AGRKSKSSKELESEAGAATEEVMLAGRNIGTLVGIFTMTATWVG 67

  Fly    62 AVTILGVSMENYQYGTMFVVINLSYVLSTPVAAYLIIPVFYRLKTASVYEYLELR-FGYATRLAA 125
            ...|.|.:...|..|.:.....:.|.:|..:...|...              ::| .||.|.|. 
 Worm    68 GAYINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFAK--------------KMREEGYITMLD- 117

  Fly   126 SLSFSLQMVLYMGIVVYAPAL----------------ALEAVTGLSQVFSIVIVGVVCTFYATLG 174
              .|..:....:|.::|.|||                .|..:.|:....|:.:...:..||...|
 Worm   118 --PFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVILGIDMNASVTLSACIAVFYTFTG 180

  Fly   175 GMKAVLITDIYQSLLMFAAVFSVIICAWVKAGSLEVIWRVAQENGRINLTNFSVDPTERHTWFTQ 239
            |..||..||:.|...:|..::..:..|.|..|:.::........|.|.  .|.    |...|.  
 Worm   181 GYYAVAYTDVVQLFCIFVGLWVCVPAAMVHDGAKDISRNAGDWIGEIG--GFK----ETSLWI-- 237

  Fly   240 ILGGCATYLAIYGVN-QTQVQRLMAVKSLSAARAALWWCLPILC-LLSLSTCFSGLCIY---WYY 299
               .|...|...|:. |...||:::.|:...|: .|.:...:.| |:::.....|....   |..
 Worm   238 ---DCMLLLVFGGIPWQVYFQRVLSSKTAHGAQ-TLSFVAGVGCILMAIPPALIGAIARNTDWRM 298

  Fly   300 RDCDPLLEG-RVNS-----RDQVMPLFVVDTMGEYTGLAGLFVSGIFCASLSTISSIISSLAAVT 358
            .|..|...| :|.|     |:.|:||........:....||  ..:..|.:|:..|.:.|.|::.
 Worm   299 TDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPRWVAFIGL--GAVSAAVMSSADSSVLSAASMF 361

  Fly   359 LEDYLKPLVSCCAKRTLTDRQTLWYSKLLSLFFGALCIGMAFMAGSIGGLLQAALSIFGIIGGPL 423
            ..:..|..:    :...::::.:...::..:..|.:...||....||.||......:..:|..|.
 Worm   362 AHNIWKLTI----RPHASEKEVIIVMRIAIICVGIMATIMALTIQSIYGLWYLCADLVYVILFPQ 422

  Fly   424 LGLFTLGMYVTKANEKGAIGGLLISLAFCFWIGFGQPKPPLVSL------DMSTAGC---PVDRS 479
            |   ...:|:.::|..|::.|..:.|.... || |:   |||||      .|.|.|.   |. |:
 Worm   423 L---LCVVYMPRSNTYGSLAGYAVGLVLRL-IG-GE---PLVSLPAFFHYPMYTDGVQYFPF-RT 478

  Fly   480 FARDIFLKTVIAVA-EEEHYFYLYRISYMW 508
            .|....:.|:..|: :.|..|...|:|..|
 Worm   479 TAMLSSMATIYIVSIQSEKLFKSGRLSPEW 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32669NP_727460.1 SLC5sbd_NIS-SMVT 7..527 CDD:271383 118/549 (21%)
cho-1NP_502539.1 SLC5sbd_CHT 7..492 CDD:271368 113/532 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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