DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Twdlalpha and wdb

DIOPT Version :9

Sequence 1:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster


Alignment Length:206 Identity:47/206 - (22%)
Similarity:78/206 - (37%) Gaps:47/206 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 QEPIIHKQFFTVAAPEEHENLERSKHL-----VIGRPQKNYRVVFIKAPSSSNANVKLSAEYAPK 228
            |||:..:....|::| ..:..||:.:|     .:...::|..|:.   |....|..::|.|:..:
  Fly   521 QEPLFRQIAKCVSSP-HFQVAERALYLWNNEYAMSLIEENNAVIM---PIMFPALYRISKEHWNQ 581

  Fly   229 EEKTVIYVLSKKDNQLEVNDIATPAPTVPSKPEVFFIKYKTDAEASHAQQQIQAEYDR------- 286
            ....::|.:.|  ..:|:|          ||    .....|.:..:..|::.:.|.||       
  Fly   582 TIVALVYNVLK--TFMEMN----------SK----LFDELTSSYKAERQKEKKRERDREELWKKL 630

  Fly   287 IEGTSEHQDGGVAPAQSVVGILDGGAIGAASSGSSNYVSGGTTGSTGGTSHYVSGGTGSTGGSYT 351
            .|..|....|..|         .|.|..:.|:.|:...|.....|.|..||.....:||:|    
  Fly   631 HELESNRSSGRTA---------GGSATTSNSAASAASTSLQPPSSAGLNSHQQQSNSGSSG---- 682

  Fly   352 TTSLSGGTSGG 362
              |||.|.:||
  Fly   683 --SLSSGGAGG 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 18/103 (17%)
wdbNP_001368946.1 B56 235..633 CDD:396263 25/131 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2085
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.