DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32564 and Pou2af1

DIOPT Version :10

Sequence 1:NP_728056.1 Gene:CG32564 / 326222 FlyBaseID:FBgn0052564 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001103069.1 Gene:Pou2af1 / 690528 RGDID:1594728 Length:256 Species:Rattus norvegicus


Alignment Length:211 Identity:64/211 - (30%)
Similarity:78/211 - (36%) Gaps:45/211 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 SVSYSAPAPAVTYSAPAPAVSYSAPAPAVTYSAPAPAPAVTYSAPAPVVRVQAAPAVTYSAPAP- 224
            :.|..||||    ..|...|....|...:...........|...||.|| :...|..|||...| 
  Rat     7 TASEQAPAP----PRPYQGVRVKEPVKELLRRKRGHTSVGTAGPPAAVV-LPHQPLATYSTVGPS 66

  Fly   225 -------APAVT---------YSAPAPAPAVTYSAPAP-APVVRVQAAPAVTYSAPAPAVTYSAP 272
                   ||.||         .|.||||   |....|| .|.....:..||  |.|..|..|..|
  Rat    67 CLDMEVSAPTVTEEGTLCAGWLSQPAPA---TLQPLAPWTPYTEYVSHEAV--SCPYSADMYVQP 126

  Fly   273 -APAVTYSGPAPAVTYSAPAPVPVV--RYSA-PAPAPISYAP---APVSYAPQPQSQQVVKTIKL 330
             .|:.|..||:..:||::|..:..|  |.:| ||..|....|   ||::|.|.||....:.|..|
  Rat   127 VCPSYTVVGPSSVLTYASPPLITNVTPRSTATPAVGPQLEGPEHQAPLTYFPWPQPLSTLPTSSL 191

  Fly   331 IVDEDRAPAQVYGPPA 346
                      .|.|||
  Rat   192 ----------QYQPPA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32564NP_728056.1 PRK12323 <165..>319 CDD:481241 55/178 (31%)
Pou2af1NP_001103069.1 PD-C2-AF1 7..255 CDD:430516 64/211 (30%)

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