DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32564 and Pou2af1

DIOPT Version :9

Sequence 1:NP_728056.1 Gene:CG32564 / 326222 FlyBaseID:FBgn0052564 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001103069.1 Gene:Pou2af1 / 690528 RGDID:1594728 Length:256 Species:Rattus norvegicus


Alignment Length:211 Identity:64/211 - (30%)
Similarity:78/211 - (36%) Gaps:45/211 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 SVSYSAPAPAVTYSAPAPAVSYSAPAPAVTYSAPAPAPAVTYSAPAPVVRVQAAPAVTYSAPAP- 224
            :.|..||||    ..|...|....|...:...........|...||.|| :...|..|||...| 
  Rat     7 TASEQAPAP----PRPYQGVRVKEPVKELLRRKRGHTSVGTAGPPAAVV-LPHQPLATYSTVGPS 66

  Fly   225 -------APAVT---------YSAPAPAPAVTYSAPAP-APVVRVQAAPAVTYSAPAPAVTYSAP 272
                   ||.||         .|.||||   |....|| .|.....:..||  |.|..|..|..|
  Rat    67 CLDMEVSAPTVTEEGTLCAGWLSQPAPA---TLQPLAPWTPYTEYVSHEAV--SCPYSADMYVQP 126

  Fly   273 -APAVTYSGPAPAVTYSAPAPVPVV--RYSA-PAPAPISYAP---APVSYAPQPQSQQVVKTIKL 330
             .|:.|..||:..:||::|..:..|  |.:| ||..|....|   ||::|.|.||....:.|..|
  Rat   127 VCPSYTVVGPSSVLTYASPPLITNVTPRSTATPAVGPQLEGPEHQAPLTYFPWPQPLSTLPTSSL 191

  Fly   331 IVDEDRAPAQVYGPPA 346
                      .|.|||
  Rat   192 ----------QYQPPA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32564NP_728056.1 PRK12323 <165..>319 CDD:237057 55/178 (31%)
Pou2af1NP_001103069.1 PD-C2-AF1 7..255 CDD:286403 64/211 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15363
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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