DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and FET3

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_013774.1 Gene:FET3 / 855080 SGDID:S000004662 Length:636 Species:Saccharomyces cerevisiae


Alignment Length:526 Identity:130/526 - (24%)
Similarity:222/526 - (42%) Gaps:90/526 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DCKYADGLESE-VMVVNGQLPGMNIEVCYGDTVVADVINSMHET-TTIHWHGMHQRLTPFMDGVP 189
            |.:..|||:|. |:..|||.|..:|.|..||.|...:.|.|:.| |::|:||:.|..|..|||||
Yeast    33 DYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVP 97

  Fly   190 HVTQYPIEAGQAFRYRFEVDHG-GTNWWHSHTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDMSE 253
            .:||.||..|....|.|.||:. ||.|:||||:.|...|:.|..:::      ..:..||:| .|
Yeast    98 FLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIK------DDSFPYDYD-EE 155

  Fly   254 HVIMIQDWVHNFV----------------ESVAENILINGRGRNLKKGVKAAKPTLYAHFPVVRG 302
            ..:.:.:|.|:.|                |.:.:|:::|.              |:...:.|...
Yeast   156 LSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNN--------------TMNLTWEVQPD 206

  Fly   303 GRYRFRVIFNG--VSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVLHANQEVS 365
            ..|..|::..|  ||.   .|.|:.|::.|:..||...|......:....|:|:..::|...:..
Yeast   207 TTYLLRIVNVGGFVSQ---YFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTD 268

  Fly   366 NYWIRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSI 430
                  |.::...|   ..:.:|....:|.:...|..:.|...|...|.|.:          :||
Yeast   269 ------KNFAIMQK---FDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYV----------DSI 314

  Fly   431 S--LANLNAQRPEPEV---APSVTFYTSMNAFEVRQGEGFRFQMDDISFSMPKMSLLQTRNLGVG 490
            .  |.:...|..|.|.   .|.......:....::.|..:.| .::|:::.||:..|.|      
Yeast   315 DNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAF-FNNITYTAPKVPTLMT------ 372

  Fly   491 QFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVISSLSQTPHPIHLHGYTFRVVGMGVLG 555
              ..:...||    |..:.:...::...:..::.||.|:::.....||.||||:.|:.:......
Yeast   373 --VLSSGDQA----NNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTY 431

  Fly   556 EQKIGQIEQI---DKKTPLPRRAKGAPL-KDSVQVPAFGYTILRFYSNSPGYWMFHCHISPHSEN 616
            :..:|::...   |.....|.    .|: :|::.|......::||.:::||.|.|||||..|...
Yeast   432 DDALGEVPHSFDPDNHPAFPE----YPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQ 492

  Fly   617 GMAAVV 622
            |:..|:
Yeast   493 GLGLVL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 129/521 (25%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 47/105 (45%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 27/154 (18%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 37/159 (23%)
FET3NP_013774.1 SufI 7..489 CDD:225043 127/515 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343589
Domainoid 1 1.000 91 1.000 Domainoid score I1742
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I948
Isobase 1 0.950 - 0 Normalized mean entropy S12213
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm9215
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X253
TreeFam 1 0.960 - -
1211.700

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